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Phylogeography and population structure of - grypotus (Richardson, 1846) as revealed by mitochondrial control region sequences

Abstract. The 137 individuals of Johnius grypotus were collected from seven localities from the Bohai Sea to the East China Sea. A 549 base pair (bp) fragment of the hypervariable region of the mtDNA control region was sequenced to examine genetic diversity and population structure. The populations...

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Autores principales: Zhao, Linlin, Yi, Dan, Li, Chunhou, Sun, Dianrong, Xu, Hanxiang, Gao, Tianxiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Pensoft Publishers 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5674069/
https://www.ncbi.nlm.nih.gov/pubmed/29118616
http://dx.doi.org/10.3897/zookeys.705.13001
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author Zhao, Linlin
Yi, Dan
Li, Chunhou
Sun, Dianrong
Xu, Hanxiang
Gao, Tianxiang
author_facet Zhao, Linlin
Yi, Dan
Li, Chunhou
Sun, Dianrong
Xu, Hanxiang
Gao, Tianxiang
author_sort Zhao, Linlin
collection PubMed
description Abstract. The 137 individuals of Johnius grypotus were collected from seven localities from the Bohai Sea to the East China Sea. A 549 base pair (bp) fragment of the hypervariable region of the mtDNA control region was sequenced to examine genetic diversity and population structure. The populations of J. grypotus showed high haplotype diversity (h) with a range from 0.7500 to 0.9740 and low nucleotide diversity (π) with a range from 0.0024 to 0.0067. Low and non-significant genetic differentiation was estimated among populations except for North Yellow Sea population, which has a significant genetic difference with other populations. The demographic history examined by mismatch distribution analyses and Bayesian skyline plot (BSP) analyses revealed that a sudden population expansion occurred almost 20 to 40 thousand years before. Relatively recent population expansion in the last glacial period, large dispersal of eggs or larvae carried by coastal current, and the homogeneity of living environment may have an important influence on the population genetic pattern.
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spelling pubmed-56740692017-11-08 Phylogeography and population structure of - grypotus (Richardson, 1846) as revealed by mitochondrial control region sequences Zhao, Linlin Yi, Dan Li, Chunhou Sun, Dianrong Xu, Hanxiang Gao, Tianxiang Zookeys Research Article Abstract. The 137 individuals of Johnius grypotus were collected from seven localities from the Bohai Sea to the East China Sea. A 549 base pair (bp) fragment of the hypervariable region of the mtDNA control region was sequenced to examine genetic diversity and population structure. The populations of J. grypotus showed high haplotype diversity (h) with a range from 0.7500 to 0.9740 and low nucleotide diversity (π) with a range from 0.0024 to 0.0067. Low and non-significant genetic differentiation was estimated among populations except for North Yellow Sea population, which has a significant genetic difference with other populations. The demographic history examined by mismatch distribution analyses and Bayesian skyline plot (BSP) analyses revealed that a sudden population expansion occurred almost 20 to 40 thousand years before. Relatively recent population expansion in the last glacial period, large dispersal of eggs or larvae carried by coastal current, and the homogeneity of living environment may have an important influence on the population genetic pattern. Pensoft Publishers 2017-10-03 /pmc/articles/PMC5674069/ /pubmed/29118616 http://dx.doi.org/10.3897/zookeys.705.13001 Text en Linlin Zhao, Dan Yi, Chunhou Li, Dianrong Sun, Hanxiang Xu, Tianxiang Gao http://creativecommons.org/licenses/by/4.0 This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Zhao, Linlin
Yi, Dan
Li, Chunhou
Sun, Dianrong
Xu, Hanxiang
Gao, Tianxiang
Phylogeography and population structure of - grypotus (Richardson, 1846) as revealed by mitochondrial control region sequences
title Phylogeography and population structure of - grypotus (Richardson, 1846) as revealed by mitochondrial control region sequences
title_full Phylogeography and population structure of - grypotus (Richardson, 1846) as revealed by mitochondrial control region sequences
title_fullStr Phylogeography and population structure of - grypotus (Richardson, 1846) as revealed by mitochondrial control region sequences
title_full_unstemmed Phylogeography and population structure of - grypotus (Richardson, 1846) as revealed by mitochondrial control region sequences
title_short Phylogeography and population structure of - grypotus (Richardson, 1846) as revealed by mitochondrial control region sequences
title_sort phylogeography and population structure of - grypotus (richardson, 1846) as revealed by mitochondrial control region sequences
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5674069/
https://www.ncbi.nlm.nih.gov/pubmed/29118616
http://dx.doi.org/10.3897/zookeys.705.13001
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