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Phylogeny of xerophilic aspergilli (subgenus Aspergillus) and taxonomic revision of section Restricti

Aspergillus section Restricti together with sister section Aspergillus (formerly Eurotium) comprises xerophilic species, that are able to grow on substrates with low water activity and in extreme environments. We adressed the monophyly of both sections within subgenus Aspergillus and applied a multi...

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Autores principales: Sklenář, F., Jurjević, Ž., Zalar, P., Frisvad, J.C., Visagie, C.M., Kolařík, M., Houbraken, J., Chen, A.J., Yilmaz, N., Seifert, K.A., Coton, M., Déniel, F., Gunde-Cimerman, N., Samson, R.A., Peterson, S.W., Hubka, V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: CBS Fungal Biodiversity Centre 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5678892/
https://www.ncbi.nlm.nih.gov/pubmed/29158611
http://dx.doi.org/10.1016/j.simyco.2017.09.002
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author Sklenář, F.
Jurjević, Ž.
Zalar, P.
Frisvad, J.C.
Visagie, C.M.
Kolařík, M.
Houbraken, J.
Chen, A.J.
Yilmaz, N.
Seifert, K.A.
Coton, M.
Déniel, F.
Gunde-Cimerman, N.
Samson, R.A.
Peterson, S.W.
Hubka, V.
author_facet Sklenář, F.
Jurjević, Ž.
Zalar, P.
Frisvad, J.C.
Visagie, C.M.
Kolařík, M.
Houbraken, J.
Chen, A.J.
Yilmaz, N.
Seifert, K.A.
Coton, M.
Déniel, F.
Gunde-Cimerman, N.
Samson, R.A.
Peterson, S.W.
Hubka, V.
author_sort Sklenář, F.
collection PubMed
description Aspergillus section Restricti together with sister section Aspergillus (formerly Eurotium) comprises xerophilic species, that are able to grow on substrates with low water activity and in extreme environments. We adressed the monophyly of both sections within subgenus Aspergillus and applied a multidisciplinary approach for definition of species boundaries in sect. Restricti. The monophyly of sections Aspergillus and Restricti was tested on a set of 102 isolates comprising all currently accepted species and was strongly supported by Maximum likelihood (ML) and Bayesian inferrence (BI) analysis based on β-tubulin (benA), calmodulin (CaM) and RNA polymerase II second largest subunit (RPB2) loci. More than 300 strains belonging to sect. Restricti from various isolation sources and four continents were characterized by DNA sequencing, and 193 isolates were selected for phylogenetic analyses and phenotypic studies. Species delimitation methods based on multispecies coalescent model were employed on DNA sequences from four loci, i.e., ID region of rDNA (ITS + 28S), CaM, benA and RPB2, and supported recognition of 21 species, including 14 new. All these species were also strongly supported in ML and BI analyses. All recognised species can be reliably identified by all four examined genetic loci. Phenotype analysis was performed to support the delimitation of new species and includes colony characteristics on seven cultivation media incubated at several temperatures, growth on an osmotic gradient (six media with NaCl concentration from 0 to 25 %) and analysis of morphology including scanning electron microscopy. The micromorphology of conidial heads, vesicle dimensions, temperature profiles and growth parameters in osmotic gradient were useful criteria for species identification. The vast majority of species in sect. Restricti produce asperglaucide, asperphenamate or both in contrast to species in sect. Aspergillus. Mycophenolic acid was detected for the first time in at least six members of the section. The ascomata of A. halophilicus do not contain auroglaucin, epiheveadride or flavoglaucin which are common in sect. Aspergillus, but shares the echinulins with sect. Aspergillus.
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spelling pubmed-56788922017-11-20 Phylogeny of xerophilic aspergilli (subgenus Aspergillus) and taxonomic revision of section Restricti Sklenář, F. Jurjević, Ž. Zalar, P. Frisvad, J.C. Visagie, C.M. Kolařík, M. Houbraken, J. Chen, A.J. Yilmaz, N. Seifert, K.A. Coton, M. Déniel, F. Gunde-Cimerman, N. Samson, R.A. Peterson, S.W. Hubka, V. Stud Mycol Research Paper Aspergillus section Restricti together with sister section Aspergillus (formerly Eurotium) comprises xerophilic species, that are able to grow on substrates with low water activity and in extreme environments. We adressed the monophyly of both sections within subgenus Aspergillus and applied a multidisciplinary approach for definition of species boundaries in sect. Restricti. The monophyly of sections Aspergillus and Restricti was tested on a set of 102 isolates comprising all currently accepted species and was strongly supported by Maximum likelihood (ML) and Bayesian inferrence (BI) analysis based on β-tubulin (benA), calmodulin (CaM) and RNA polymerase II second largest subunit (RPB2) loci. More than 300 strains belonging to sect. Restricti from various isolation sources and four continents were characterized by DNA sequencing, and 193 isolates were selected for phylogenetic analyses and phenotypic studies. Species delimitation methods based on multispecies coalescent model were employed on DNA sequences from four loci, i.e., ID region of rDNA (ITS + 28S), CaM, benA and RPB2, and supported recognition of 21 species, including 14 new. All these species were also strongly supported in ML and BI analyses. All recognised species can be reliably identified by all four examined genetic loci. Phenotype analysis was performed to support the delimitation of new species and includes colony characteristics on seven cultivation media incubated at several temperatures, growth on an osmotic gradient (six media with NaCl concentration from 0 to 25 %) and analysis of morphology including scanning electron microscopy. The micromorphology of conidial heads, vesicle dimensions, temperature profiles and growth parameters in osmotic gradient were useful criteria for species identification. The vast majority of species in sect. Restricti produce asperglaucide, asperphenamate or both in contrast to species in sect. Aspergillus. Mycophenolic acid was detected for the first time in at least six members of the section. The ascomata of A. halophilicus do not contain auroglaucin, epiheveadride or flavoglaucin which are common in sect. Aspergillus, but shares the echinulins with sect. Aspergillus. CBS Fungal Biodiversity Centre 2017-09 2017-09-27 /pmc/articles/PMC5678892/ /pubmed/29158611 http://dx.doi.org/10.1016/j.simyco.2017.09.002 Text en © 2017 Westerdijk Fungal Biodiversity Institute. Production and hosting by ELSEVIER B.V. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Paper
Sklenář, F.
Jurjević, Ž.
Zalar, P.
Frisvad, J.C.
Visagie, C.M.
Kolařík, M.
Houbraken, J.
Chen, A.J.
Yilmaz, N.
Seifert, K.A.
Coton, M.
Déniel, F.
Gunde-Cimerman, N.
Samson, R.A.
Peterson, S.W.
Hubka, V.
Phylogeny of xerophilic aspergilli (subgenus Aspergillus) and taxonomic revision of section Restricti
title Phylogeny of xerophilic aspergilli (subgenus Aspergillus) and taxonomic revision of section Restricti
title_full Phylogeny of xerophilic aspergilli (subgenus Aspergillus) and taxonomic revision of section Restricti
title_fullStr Phylogeny of xerophilic aspergilli (subgenus Aspergillus) and taxonomic revision of section Restricti
title_full_unstemmed Phylogeny of xerophilic aspergilli (subgenus Aspergillus) and taxonomic revision of section Restricti
title_short Phylogeny of xerophilic aspergilli (subgenus Aspergillus) and taxonomic revision of section Restricti
title_sort phylogeny of xerophilic aspergilli (subgenus aspergillus) and taxonomic revision of section restricti
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5678892/
https://www.ncbi.nlm.nih.gov/pubmed/29158611
http://dx.doi.org/10.1016/j.simyco.2017.09.002
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