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Universal glass-forming behavior of in vitro and living cytoplasm
Physiological processes in cells are performed efficiently without getting jammed although cytoplasm is highly crowded with various macromolecules. Elucidating the physical machinery is challenging because the interior of a cell is so complex and driven far from equilibrium by metabolic activities....
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5680342/ https://www.ncbi.nlm.nih.gov/pubmed/29123156 http://dx.doi.org/10.1038/s41598-017-14883-y |
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author | Nishizawa, Kenji Fujiwara, Kei Ikenaga, Masahiro Nakajo, Nobushige Yanagisawa, Miho Mizuno, Daisuke |
author_facet | Nishizawa, Kenji Fujiwara, Kei Ikenaga, Masahiro Nakajo, Nobushige Yanagisawa, Miho Mizuno, Daisuke |
author_sort | Nishizawa, Kenji |
collection | PubMed |
description | Physiological processes in cells are performed efficiently without getting jammed although cytoplasm is highly crowded with various macromolecules. Elucidating the physical machinery is challenging because the interior of a cell is so complex and driven far from equilibrium by metabolic activities. Here, we studied the mechanics of in vitro and living cytoplasm using the particle-tracking and manipulation technique. The molecular crowding effect on cytoplasmic mechanics was selectively studied by preparing simple in vitro models of cytoplasm from which both the metabolism and cytoskeletons were removed. We obtained direct evidence of the cytoplasmic glass transition; a dramatic increase in viscosity upon crowding quantitatively conformed to the super-Arrhenius formula, which is typical for fragile colloidal suspensions close to jamming. Furthermore, the glass-forming behaviors were found to be universally conserved in all the cytoplasm samples that originated from different species and developmental stages; they showed the same tendency for diverging at the macromolecule concentrations relevant for living cells. Notably, such fragile behavior disappeared in metabolically active living cells whose viscosity showed a genuine Arrhenius increase as in typical strong glass formers. Being actively driven by metabolism, the living cytoplasm forms glass that is fundamentally different from that of its non-living counterpart. |
format | Online Article Text |
id | pubmed-5680342 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-56803422017-11-17 Universal glass-forming behavior of in vitro and living cytoplasm Nishizawa, Kenji Fujiwara, Kei Ikenaga, Masahiro Nakajo, Nobushige Yanagisawa, Miho Mizuno, Daisuke Sci Rep Article Physiological processes in cells are performed efficiently without getting jammed although cytoplasm is highly crowded with various macromolecules. Elucidating the physical machinery is challenging because the interior of a cell is so complex and driven far from equilibrium by metabolic activities. Here, we studied the mechanics of in vitro and living cytoplasm using the particle-tracking and manipulation technique. The molecular crowding effect on cytoplasmic mechanics was selectively studied by preparing simple in vitro models of cytoplasm from which both the metabolism and cytoskeletons were removed. We obtained direct evidence of the cytoplasmic glass transition; a dramatic increase in viscosity upon crowding quantitatively conformed to the super-Arrhenius formula, which is typical for fragile colloidal suspensions close to jamming. Furthermore, the glass-forming behaviors were found to be universally conserved in all the cytoplasm samples that originated from different species and developmental stages; they showed the same tendency for diverging at the macromolecule concentrations relevant for living cells. Notably, such fragile behavior disappeared in metabolically active living cells whose viscosity showed a genuine Arrhenius increase as in typical strong glass formers. Being actively driven by metabolism, the living cytoplasm forms glass that is fundamentally different from that of its non-living counterpart. Nature Publishing Group UK 2017-11-09 /pmc/articles/PMC5680342/ /pubmed/29123156 http://dx.doi.org/10.1038/s41598-017-14883-y Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Nishizawa, Kenji Fujiwara, Kei Ikenaga, Masahiro Nakajo, Nobushige Yanagisawa, Miho Mizuno, Daisuke Universal glass-forming behavior of in vitro and living cytoplasm |
title | Universal glass-forming behavior of in vitro and living cytoplasm |
title_full | Universal glass-forming behavior of in vitro and living cytoplasm |
title_fullStr | Universal glass-forming behavior of in vitro and living cytoplasm |
title_full_unstemmed | Universal glass-forming behavior of in vitro and living cytoplasm |
title_short | Universal glass-forming behavior of in vitro and living cytoplasm |
title_sort | universal glass-forming behavior of in vitro and living cytoplasm |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5680342/ https://www.ncbi.nlm.nih.gov/pubmed/29123156 http://dx.doi.org/10.1038/s41598-017-14883-y |
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