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Discovering the stacking landscape of a pyridine-pyridine system

Extremely extensive calculations of potential energy surfaces for the parallel-displaced configuration of pyridine dimer systems have been carried out using a dispersion-corrected density functional. Instead of focusing on stationary geometries these calculations provide much deeper insight into the...

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Autor principal: Sierański, Tomasz
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5680376/
https://www.ncbi.nlm.nih.gov/pubmed/29124340
http://dx.doi.org/10.1007/s00894-017-3496-4
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author Sierański, Tomasz
author_facet Sierański, Tomasz
author_sort Sierański, Tomasz
collection PubMed
description Extremely extensive calculations of potential energy surfaces for the parallel-displaced configuration of pyridine dimer systems have been carried out using a dispersion-corrected density functional. Instead of focusing on stationary geometries these calculations provide much deeper insight into the “landscape” of the interaction energies of the particular systems—one can learn how the pyridine dimer stability changes along with various geometrical parameters. Other calculations such as natural bond orbital and energy decomposition have also been applied. The interplay of two significant factors, electrostatic forces and electron correlation effects, have been evaluated. The role of π···π interactions in the stacked pyridine systems has also been confirmed, and surprisingly, this happened to be true even for the geometries where the formation of C-H···π interactions might be proposed instead. The combination of many different methods has revealed the complexity of the stacking interactions. Apart from providing a “literal new look” into pyridine interaction patterns another picture has emerged. A stacking interaction in a pyridine dimer system is perceived as a combination of many different sources of the interaction energy, including orbital ones, and this is true for many different geometries. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s00894-017-3496-4) contains supplementary material, which is available to authorized users.
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spelling pubmed-56803762017-11-21 Discovering the stacking landscape of a pyridine-pyridine system Sierański, Tomasz J Mol Model Original Paper Extremely extensive calculations of potential energy surfaces for the parallel-displaced configuration of pyridine dimer systems have been carried out using a dispersion-corrected density functional. Instead of focusing on stationary geometries these calculations provide much deeper insight into the “landscape” of the interaction energies of the particular systems—one can learn how the pyridine dimer stability changes along with various geometrical parameters. Other calculations such as natural bond orbital and energy decomposition have also been applied. The interplay of two significant factors, electrostatic forces and electron correlation effects, have been evaluated. The role of π···π interactions in the stacked pyridine systems has also been confirmed, and surprisingly, this happened to be true even for the geometries where the formation of C-H···π interactions might be proposed instead. The combination of many different methods has revealed the complexity of the stacking interactions. Apart from providing a “literal new look” into pyridine interaction patterns another picture has emerged. A stacking interaction in a pyridine dimer system is perceived as a combination of many different sources of the interaction energy, including orbital ones, and this is true for many different geometries. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s00894-017-3496-4) contains supplementary material, which is available to authorized users. Springer Berlin Heidelberg 2017-11-09 2017 /pmc/articles/PMC5680376/ /pubmed/29124340 http://dx.doi.org/10.1007/s00894-017-3496-4 Text en © The Author(s) 2017 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Original Paper
Sierański, Tomasz
Discovering the stacking landscape of a pyridine-pyridine system
title Discovering the stacking landscape of a pyridine-pyridine system
title_full Discovering the stacking landscape of a pyridine-pyridine system
title_fullStr Discovering the stacking landscape of a pyridine-pyridine system
title_full_unstemmed Discovering the stacking landscape of a pyridine-pyridine system
title_short Discovering the stacking landscape of a pyridine-pyridine system
title_sort discovering the stacking landscape of a pyridine-pyridine system
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5680376/
https://www.ncbi.nlm.nih.gov/pubmed/29124340
http://dx.doi.org/10.1007/s00894-017-3496-4
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