Cargando…

Elevated mitochondrial genome variation after 50 generations of radiation exposure in a wild rodent

Currently, the effects of chronic, continuous low dose environmental irradiation on the mitochondrial genome of resident small mammals are unknown. Using the bank vole (Myodes glareolus) as a model system, we tested the hypothesis that approximately 50 generations of exposure to the Chernobyl enviro...

Descripción completa

Detalles Bibliográficos
Autores principales: Baker, Robert J., Dickins, Benjamin, Wickliffe, Jeffrey K., Khan, Faisal A. A., Gaschak, Sergey, Makova, Kateryna D., Phillips, Caleb D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5680428/
https://www.ncbi.nlm.nih.gov/pubmed/29151870
http://dx.doi.org/10.1111/eva.12475
_version_ 1783277757971562496
author Baker, Robert J.
Dickins, Benjamin
Wickliffe, Jeffrey K.
Khan, Faisal A. A.
Gaschak, Sergey
Makova, Kateryna D.
Phillips, Caleb D.
author_facet Baker, Robert J.
Dickins, Benjamin
Wickliffe, Jeffrey K.
Khan, Faisal A. A.
Gaschak, Sergey
Makova, Kateryna D.
Phillips, Caleb D.
author_sort Baker, Robert J.
collection PubMed
description Currently, the effects of chronic, continuous low dose environmental irradiation on the mitochondrial genome of resident small mammals are unknown. Using the bank vole (Myodes glareolus) as a model system, we tested the hypothesis that approximately 50 generations of exposure to the Chernobyl environment has significantly altered genetic diversity of the mitochondrial genome. Using deep sequencing, we compared mitochondrial genomes from 131 individuals from reference sites with radioactive contamination comparable to that present in northern Ukraine before the 26 April 1986 meltdown, to populations where substantial fallout was deposited following the nuclear accident. Population genetic variables revealed significant differences among populations from contaminated and uncontaminated localities. Therefore, we rejected the null hypothesis of no significant genetic effect from 50 generations of exposure to the environment created by the Chernobyl meltdown. Samples from contaminated localities exhibited significantly higher numbers of haplotypes and polymorphic loci, elevated genetic diversity, and a significantly higher average number of substitutions per site across mitochondrial gene regions. Observed genetic variation was dominated by synonymous mutations, which may indicate a history of purify selection against nonsynonymous or insertion/deletion mutations. These significant differences were not attributable to sample size artifacts. The observed increase in mitochondrial genomic diversity in voles from radioactive sites is consistent with the possibility that chronic, continuous irradiation resulting from the Chernobyl disaster has produced an accelerated mutation rate in this species over the last 25 years. Our results, being the first to demonstrate this phenomenon in a wild mammalian species, are important for understanding genetic consequences of exposure to low‐dose radiation sources.
format Online
Article
Text
id pubmed-5680428
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-56804282017-11-17 Elevated mitochondrial genome variation after 50 generations of radiation exposure in a wild rodent Baker, Robert J. Dickins, Benjamin Wickliffe, Jeffrey K. Khan, Faisal A. A. Gaschak, Sergey Makova, Kateryna D. Phillips, Caleb D. Evol Appl Original Articles Currently, the effects of chronic, continuous low dose environmental irradiation on the mitochondrial genome of resident small mammals are unknown. Using the bank vole (Myodes glareolus) as a model system, we tested the hypothesis that approximately 50 generations of exposure to the Chernobyl environment has significantly altered genetic diversity of the mitochondrial genome. Using deep sequencing, we compared mitochondrial genomes from 131 individuals from reference sites with radioactive contamination comparable to that present in northern Ukraine before the 26 April 1986 meltdown, to populations where substantial fallout was deposited following the nuclear accident. Population genetic variables revealed significant differences among populations from contaminated and uncontaminated localities. Therefore, we rejected the null hypothesis of no significant genetic effect from 50 generations of exposure to the environment created by the Chernobyl meltdown. Samples from contaminated localities exhibited significantly higher numbers of haplotypes and polymorphic loci, elevated genetic diversity, and a significantly higher average number of substitutions per site across mitochondrial gene regions. Observed genetic variation was dominated by synonymous mutations, which may indicate a history of purify selection against nonsynonymous or insertion/deletion mutations. These significant differences were not attributable to sample size artifacts. The observed increase in mitochondrial genomic diversity in voles from radioactive sites is consistent with the possibility that chronic, continuous irradiation resulting from the Chernobyl disaster has produced an accelerated mutation rate in this species over the last 25 years. Our results, being the first to demonstrate this phenomenon in a wild mammalian species, are important for understanding genetic consequences of exposure to low‐dose radiation sources. John Wiley and Sons Inc. 2017-06-22 /pmc/articles/PMC5680428/ /pubmed/29151870 http://dx.doi.org/10.1111/eva.12475 Text en © 2017 The Authors. Evolutionary Applications published by John Wiley & Sons Ltd This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Baker, Robert J.
Dickins, Benjamin
Wickliffe, Jeffrey K.
Khan, Faisal A. A.
Gaschak, Sergey
Makova, Kateryna D.
Phillips, Caleb D.
Elevated mitochondrial genome variation after 50 generations of radiation exposure in a wild rodent
title Elevated mitochondrial genome variation after 50 generations of radiation exposure in a wild rodent
title_full Elevated mitochondrial genome variation after 50 generations of radiation exposure in a wild rodent
title_fullStr Elevated mitochondrial genome variation after 50 generations of radiation exposure in a wild rodent
title_full_unstemmed Elevated mitochondrial genome variation after 50 generations of radiation exposure in a wild rodent
title_short Elevated mitochondrial genome variation after 50 generations of radiation exposure in a wild rodent
title_sort elevated mitochondrial genome variation after 50 generations of radiation exposure in a wild rodent
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5680428/
https://www.ncbi.nlm.nih.gov/pubmed/29151870
http://dx.doi.org/10.1111/eva.12475
work_keys_str_mv AT bakerrobertj elevatedmitochondrialgenomevariationafter50generationsofradiationexposureinawildrodent
AT dickinsbenjamin elevatedmitochondrialgenomevariationafter50generationsofradiationexposureinawildrodent
AT wickliffejeffreyk elevatedmitochondrialgenomevariationafter50generationsofradiationexposureinawildrodent
AT khanfaisalaa elevatedmitochondrialgenomevariationafter50generationsofradiationexposureinawildrodent
AT gaschaksergey elevatedmitochondrialgenomevariationafter50generationsofradiationexposureinawildrodent
AT makovakaterynad elevatedmitochondrialgenomevariationafter50generationsofradiationexposureinawildrodent
AT phillipscalebd elevatedmitochondrialgenomevariationafter50generationsofradiationexposureinawildrodent