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Comparative proteomic analysis between nitrogen supplemented and starved conditions in Magnaporthe oryzae

BACKGROUND: Fungi are constantly exposed to nitrogen limiting environments, and thus the efficient regulation of nitrogen metabolism is essential for their survival, growth, development and pathogenicity. To understand how the rice blast pathogen Magnaporthe oryzae copes with limited nitrogen availa...

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Autores principales: Oh, Yeonyee, Robertson, Suzanne L., Parker, Jennifer, Muddiman, David C., Dean, Ralph A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5684745/
https://www.ncbi.nlm.nih.gov/pubmed/29158724
http://dx.doi.org/10.1186/s12953-017-0128-y
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author Oh, Yeonyee
Robertson, Suzanne L.
Parker, Jennifer
Muddiman, David C.
Dean, Ralph A.
author_facet Oh, Yeonyee
Robertson, Suzanne L.
Parker, Jennifer
Muddiman, David C.
Dean, Ralph A.
author_sort Oh, Yeonyee
collection PubMed
description BACKGROUND: Fungi are constantly exposed to nitrogen limiting environments, and thus the efficient regulation of nitrogen metabolism is essential for their survival, growth, development and pathogenicity. To understand how the rice blast pathogen Magnaporthe oryzae copes with limited nitrogen availability, a global proteome analysis under nitrogen supplemented and nitrogen starved conditions was completed. METHODS: M. oryzae strain 70–15 was cultivated in liquid minimal media and transferred to media with nitrate or without a nitrogen source. Proteins were isolated and subjected to unfractionated gel-free based liquid chromatography-tandem mass spectrometry (LC-MS/MS). The subcellular localization and function of the identified proteins were predicted using bioinformatics tools. RESULTS: A total of 5498 M. oryzae proteins were identified. Comparative analysis of protein expression showed 363 proteins and 266 proteins significantly induced or uniquely expressed under nitrogen starved or nitrogen supplemented conditions, respectively. A functional analysis of differentially expressed proteins revealed that during nitrogen starvation nitrogen catabolite repression, melanin biosynthesis, protein degradation and protein translation pathways underwent extensive alterations. In addition, nitrogen starvation induced accumulation of various extracellular proteins including small extracellular proteins consistent with observations of a link between nitrogen starvation and the development of pathogenicity in M. oryzae. CONCLUSION: The results from this study provide a comprehensive understanding of fungal responses to nitrogen availability. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12953-017-0128-y) contains supplementary material, which is available to authorized users.
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spelling pubmed-56847452017-11-20 Comparative proteomic analysis between nitrogen supplemented and starved conditions in Magnaporthe oryzae Oh, Yeonyee Robertson, Suzanne L. Parker, Jennifer Muddiman, David C. Dean, Ralph A. Proteome Sci Research BACKGROUND: Fungi are constantly exposed to nitrogen limiting environments, and thus the efficient regulation of nitrogen metabolism is essential for their survival, growth, development and pathogenicity. To understand how the rice blast pathogen Magnaporthe oryzae copes with limited nitrogen availability, a global proteome analysis under nitrogen supplemented and nitrogen starved conditions was completed. METHODS: M. oryzae strain 70–15 was cultivated in liquid minimal media and transferred to media with nitrate or without a nitrogen source. Proteins were isolated and subjected to unfractionated gel-free based liquid chromatography-tandem mass spectrometry (LC-MS/MS). The subcellular localization and function of the identified proteins were predicted using bioinformatics tools. RESULTS: A total of 5498 M. oryzae proteins were identified. Comparative analysis of protein expression showed 363 proteins and 266 proteins significantly induced or uniquely expressed under nitrogen starved or nitrogen supplemented conditions, respectively. A functional analysis of differentially expressed proteins revealed that during nitrogen starvation nitrogen catabolite repression, melanin biosynthesis, protein degradation and protein translation pathways underwent extensive alterations. In addition, nitrogen starvation induced accumulation of various extracellular proteins including small extracellular proteins consistent with observations of a link between nitrogen starvation and the development of pathogenicity in M. oryzae. CONCLUSION: The results from this study provide a comprehensive understanding of fungal responses to nitrogen availability. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12953-017-0128-y) contains supplementary material, which is available to authorized users. BioMed Central 2017-11-13 /pmc/articles/PMC5684745/ /pubmed/29158724 http://dx.doi.org/10.1186/s12953-017-0128-y Text en © The Author(s). 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Oh, Yeonyee
Robertson, Suzanne L.
Parker, Jennifer
Muddiman, David C.
Dean, Ralph A.
Comparative proteomic analysis between nitrogen supplemented and starved conditions in Magnaporthe oryzae
title Comparative proteomic analysis between nitrogen supplemented and starved conditions in Magnaporthe oryzae
title_full Comparative proteomic analysis between nitrogen supplemented and starved conditions in Magnaporthe oryzae
title_fullStr Comparative proteomic analysis between nitrogen supplemented and starved conditions in Magnaporthe oryzae
title_full_unstemmed Comparative proteomic analysis between nitrogen supplemented and starved conditions in Magnaporthe oryzae
title_short Comparative proteomic analysis between nitrogen supplemented and starved conditions in Magnaporthe oryzae
title_sort comparative proteomic analysis between nitrogen supplemented and starved conditions in magnaporthe oryzae
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5684745/
https://www.ncbi.nlm.nih.gov/pubmed/29158724
http://dx.doi.org/10.1186/s12953-017-0128-y
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