Cargando…
Comparative proteomic analysis between nitrogen supplemented and starved conditions in Magnaporthe oryzae
BACKGROUND: Fungi are constantly exposed to nitrogen limiting environments, and thus the efficient regulation of nitrogen metabolism is essential for their survival, growth, development and pathogenicity. To understand how the rice blast pathogen Magnaporthe oryzae copes with limited nitrogen availa...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5684745/ https://www.ncbi.nlm.nih.gov/pubmed/29158724 http://dx.doi.org/10.1186/s12953-017-0128-y |
_version_ | 1783278540101255168 |
---|---|
author | Oh, Yeonyee Robertson, Suzanne L. Parker, Jennifer Muddiman, David C. Dean, Ralph A. |
author_facet | Oh, Yeonyee Robertson, Suzanne L. Parker, Jennifer Muddiman, David C. Dean, Ralph A. |
author_sort | Oh, Yeonyee |
collection | PubMed |
description | BACKGROUND: Fungi are constantly exposed to nitrogen limiting environments, and thus the efficient regulation of nitrogen metabolism is essential for their survival, growth, development and pathogenicity. To understand how the rice blast pathogen Magnaporthe oryzae copes with limited nitrogen availability, a global proteome analysis under nitrogen supplemented and nitrogen starved conditions was completed. METHODS: M. oryzae strain 70–15 was cultivated in liquid minimal media and transferred to media with nitrate or without a nitrogen source. Proteins were isolated and subjected to unfractionated gel-free based liquid chromatography-tandem mass spectrometry (LC-MS/MS). The subcellular localization and function of the identified proteins were predicted using bioinformatics tools. RESULTS: A total of 5498 M. oryzae proteins were identified. Comparative analysis of protein expression showed 363 proteins and 266 proteins significantly induced or uniquely expressed under nitrogen starved or nitrogen supplemented conditions, respectively. A functional analysis of differentially expressed proteins revealed that during nitrogen starvation nitrogen catabolite repression, melanin biosynthesis, protein degradation and protein translation pathways underwent extensive alterations. In addition, nitrogen starvation induced accumulation of various extracellular proteins including small extracellular proteins consistent with observations of a link between nitrogen starvation and the development of pathogenicity in M. oryzae. CONCLUSION: The results from this study provide a comprehensive understanding of fungal responses to nitrogen availability. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12953-017-0128-y) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-5684745 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-56847452017-11-20 Comparative proteomic analysis between nitrogen supplemented and starved conditions in Magnaporthe oryzae Oh, Yeonyee Robertson, Suzanne L. Parker, Jennifer Muddiman, David C. Dean, Ralph A. Proteome Sci Research BACKGROUND: Fungi are constantly exposed to nitrogen limiting environments, and thus the efficient regulation of nitrogen metabolism is essential for their survival, growth, development and pathogenicity. To understand how the rice blast pathogen Magnaporthe oryzae copes with limited nitrogen availability, a global proteome analysis under nitrogen supplemented and nitrogen starved conditions was completed. METHODS: M. oryzae strain 70–15 was cultivated in liquid minimal media and transferred to media with nitrate or without a nitrogen source. Proteins were isolated and subjected to unfractionated gel-free based liquid chromatography-tandem mass spectrometry (LC-MS/MS). The subcellular localization and function of the identified proteins were predicted using bioinformatics tools. RESULTS: A total of 5498 M. oryzae proteins were identified. Comparative analysis of protein expression showed 363 proteins and 266 proteins significantly induced or uniquely expressed under nitrogen starved or nitrogen supplemented conditions, respectively. A functional analysis of differentially expressed proteins revealed that during nitrogen starvation nitrogen catabolite repression, melanin biosynthesis, protein degradation and protein translation pathways underwent extensive alterations. In addition, nitrogen starvation induced accumulation of various extracellular proteins including small extracellular proteins consistent with observations of a link between nitrogen starvation and the development of pathogenicity in M. oryzae. CONCLUSION: The results from this study provide a comprehensive understanding of fungal responses to nitrogen availability. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12953-017-0128-y) contains supplementary material, which is available to authorized users. BioMed Central 2017-11-13 /pmc/articles/PMC5684745/ /pubmed/29158724 http://dx.doi.org/10.1186/s12953-017-0128-y Text en © The Author(s). 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Oh, Yeonyee Robertson, Suzanne L. Parker, Jennifer Muddiman, David C. Dean, Ralph A. Comparative proteomic analysis between nitrogen supplemented and starved conditions in Magnaporthe oryzae |
title | Comparative proteomic analysis between nitrogen supplemented and starved conditions in Magnaporthe oryzae |
title_full | Comparative proteomic analysis between nitrogen supplemented and starved conditions in Magnaporthe oryzae |
title_fullStr | Comparative proteomic analysis between nitrogen supplemented and starved conditions in Magnaporthe oryzae |
title_full_unstemmed | Comparative proteomic analysis between nitrogen supplemented and starved conditions in Magnaporthe oryzae |
title_short | Comparative proteomic analysis between nitrogen supplemented and starved conditions in Magnaporthe oryzae |
title_sort | comparative proteomic analysis between nitrogen supplemented and starved conditions in magnaporthe oryzae |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5684745/ https://www.ncbi.nlm.nih.gov/pubmed/29158724 http://dx.doi.org/10.1186/s12953-017-0128-y |
work_keys_str_mv | AT ohyeonyee comparativeproteomicanalysisbetweennitrogensupplementedandstarvedconditionsinmagnaportheoryzae AT robertsonsuzannel comparativeproteomicanalysisbetweennitrogensupplementedandstarvedconditionsinmagnaportheoryzae AT parkerjennifer comparativeproteomicanalysisbetweennitrogensupplementedandstarvedconditionsinmagnaportheoryzae AT muddimandavidc comparativeproteomicanalysisbetweennitrogensupplementedandstarvedconditionsinmagnaportheoryzae AT deanralpha comparativeproteomicanalysisbetweennitrogensupplementedandstarvedconditionsinmagnaportheoryzae |