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Structural disorder and induced folding within two cereal, ABA stress and ripening (ASR) proteins
Abscisic acid (ABA), stress and ripening (ASR) proteins are plant-specific proteins involved in plant response to multiple abiotic stresses. We previously isolated the ASR genes and cDNAs from durum wheat (TtASR1) and barley (HvASR1). Here, we show that HvASR1 and TtASR1 are consistently predicted t...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5686140/ https://www.ncbi.nlm.nih.gov/pubmed/29138428 http://dx.doi.org/10.1038/s41598-017-15299-4 |
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author | Hamdi, Karama Salladini, Edoardo O’Brien, Darragh P. Brier, Sébastien Chenal, Alexandre Yacoubi, Ines Longhi, Sonia |
author_facet | Hamdi, Karama Salladini, Edoardo O’Brien, Darragh P. Brier, Sébastien Chenal, Alexandre Yacoubi, Ines Longhi, Sonia |
author_sort | Hamdi, Karama |
collection | PubMed |
description | Abscisic acid (ABA), stress and ripening (ASR) proteins are plant-specific proteins involved in plant response to multiple abiotic stresses. We previously isolated the ASR genes and cDNAs from durum wheat (TtASR1) and barley (HvASR1). Here, we show that HvASR1 and TtASR1 are consistently predicted to be disordered and further confirm this experimentally. Addition of glycerol, which mimics dehydration, triggers a gain of structure in both proteins. Limited proteolysis showed that they are highly sensitive to protease degradation. Addition of 2,2,2-trifluoroethanol (TFE) however, results in a decreased susceptibility to proteolysis that is paralleled by a gain of structure. Mass spectrometry analyses (MS) led to the identification of a protein fragment resistant to proteolysis. Addition of zinc also induces a gain of structure and Hydrogen/Deuterium eXchange-Mass Spectrometry (HDX-MS) allowed identification of the region involved in the disorder-to-order transition. This study is the first reported experimental characterization of HvASR1 and TtASR1 proteins, and paves the way for future studies aimed at unveiling the functional impact of the structural transitions that these proteins undergo in the presence of zinc and at achieving atomic-resolution conformational ensemble description of these two plant intrinsically disordered proteins (IDPs). |
format | Online Article Text |
id | pubmed-5686140 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-56861402017-11-21 Structural disorder and induced folding within two cereal, ABA stress and ripening (ASR) proteins Hamdi, Karama Salladini, Edoardo O’Brien, Darragh P. Brier, Sébastien Chenal, Alexandre Yacoubi, Ines Longhi, Sonia Sci Rep Article Abscisic acid (ABA), stress and ripening (ASR) proteins are plant-specific proteins involved in plant response to multiple abiotic stresses. We previously isolated the ASR genes and cDNAs from durum wheat (TtASR1) and barley (HvASR1). Here, we show that HvASR1 and TtASR1 are consistently predicted to be disordered and further confirm this experimentally. Addition of glycerol, which mimics dehydration, triggers a gain of structure in both proteins. Limited proteolysis showed that they are highly sensitive to protease degradation. Addition of 2,2,2-trifluoroethanol (TFE) however, results in a decreased susceptibility to proteolysis that is paralleled by a gain of structure. Mass spectrometry analyses (MS) led to the identification of a protein fragment resistant to proteolysis. Addition of zinc also induces a gain of structure and Hydrogen/Deuterium eXchange-Mass Spectrometry (HDX-MS) allowed identification of the region involved in the disorder-to-order transition. This study is the first reported experimental characterization of HvASR1 and TtASR1 proteins, and paves the way for future studies aimed at unveiling the functional impact of the structural transitions that these proteins undergo in the presence of zinc and at achieving atomic-resolution conformational ensemble description of these two plant intrinsically disordered proteins (IDPs). Nature Publishing Group UK 2017-11-14 /pmc/articles/PMC5686140/ /pubmed/29138428 http://dx.doi.org/10.1038/s41598-017-15299-4 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Hamdi, Karama Salladini, Edoardo O’Brien, Darragh P. Brier, Sébastien Chenal, Alexandre Yacoubi, Ines Longhi, Sonia Structural disorder and induced folding within two cereal, ABA stress and ripening (ASR) proteins |
title | Structural disorder and induced folding within two cereal, ABA stress and ripening (ASR) proteins |
title_full | Structural disorder and induced folding within two cereal, ABA stress and ripening (ASR) proteins |
title_fullStr | Structural disorder and induced folding within two cereal, ABA stress and ripening (ASR) proteins |
title_full_unstemmed | Structural disorder and induced folding within two cereal, ABA stress and ripening (ASR) proteins |
title_short | Structural disorder and induced folding within two cereal, ABA stress and ripening (ASR) proteins |
title_sort | structural disorder and induced folding within two cereal, aba stress and ripening (asr) proteins |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5686140/ https://www.ncbi.nlm.nih.gov/pubmed/29138428 http://dx.doi.org/10.1038/s41598-017-15299-4 |
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