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Metagenomic analysis of intertidal hypersaline microbial mats from Elkhorn Slough, California, grown with and without molybdate
Cyanobacterial mats are laminated microbial ecosystems which occur in highly diverse environments and which may provide a possible model for early life on Earth. Their ability to produce hydrogen also makes them of interest from a biotechnological and bioenergy perspective. Samples of an intertidal...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5688640/ https://www.ncbi.nlm.nih.gov/pubmed/29167704 http://dx.doi.org/10.1186/s40793-017-0279-6 |
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author | D’haeseleer, Patrik Lee, Jackson Z. Prufert-Bebout, Leslie Burow, Luke C. Detweiler, Angela M. Weber, Peter K. Karaoz, Ulas Brodie, Eoin L. Glavina del Rio, Tijana Tringe, Susannah G. Bebout, Brad M. Pett-Ridge, Jennifer |
author_facet | D’haeseleer, Patrik Lee, Jackson Z. Prufert-Bebout, Leslie Burow, Luke C. Detweiler, Angela M. Weber, Peter K. Karaoz, Ulas Brodie, Eoin L. Glavina del Rio, Tijana Tringe, Susannah G. Bebout, Brad M. Pett-Ridge, Jennifer |
author_sort | D’haeseleer, Patrik |
collection | PubMed |
description | Cyanobacterial mats are laminated microbial ecosystems which occur in highly diverse environments and which may provide a possible model for early life on Earth. Their ability to produce hydrogen also makes them of interest from a biotechnological and bioenergy perspective. Samples of an intertidal microbial mat from the Elkhorn Slough estuary in Monterey Bay, California, were transplanted to a greenhouse at NASA Ames Research Center to study a 24-h diel cycle, in the presence or absence of molybdate (which inhibits biohydrogen consumption by sulfate reducers). Here, we present metagenomic analyses of four samples that will be used as references for future metatranscriptomic analyses of this diel time series. |
format | Online Article Text |
id | pubmed-5688640 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-56886402017-11-22 Metagenomic analysis of intertidal hypersaline microbial mats from Elkhorn Slough, California, grown with and without molybdate D’haeseleer, Patrik Lee, Jackson Z. Prufert-Bebout, Leslie Burow, Luke C. Detweiler, Angela M. Weber, Peter K. Karaoz, Ulas Brodie, Eoin L. Glavina del Rio, Tijana Tringe, Susannah G. Bebout, Brad M. Pett-Ridge, Jennifer Stand Genomic Sci Metagenome Report Cyanobacterial mats are laminated microbial ecosystems which occur in highly diverse environments and which may provide a possible model for early life on Earth. Their ability to produce hydrogen also makes them of interest from a biotechnological and bioenergy perspective. Samples of an intertidal microbial mat from the Elkhorn Slough estuary in Monterey Bay, California, were transplanted to a greenhouse at NASA Ames Research Center to study a 24-h diel cycle, in the presence or absence of molybdate (which inhibits biohydrogen consumption by sulfate reducers). Here, we present metagenomic analyses of four samples that will be used as references for future metatranscriptomic analyses of this diel time series. BioMed Central 2017-11-15 /pmc/articles/PMC5688640/ /pubmed/29167704 http://dx.doi.org/10.1186/s40793-017-0279-6 Text en © The Author(s). 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Metagenome Report D’haeseleer, Patrik Lee, Jackson Z. Prufert-Bebout, Leslie Burow, Luke C. Detweiler, Angela M. Weber, Peter K. Karaoz, Ulas Brodie, Eoin L. Glavina del Rio, Tijana Tringe, Susannah G. Bebout, Brad M. Pett-Ridge, Jennifer Metagenomic analysis of intertidal hypersaline microbial mats from Elkhorn Slough, California, grown with and without molybdate |
title | Metagenomic analysis of intertidal hypersaline microbial mats from Elkhorn Slough, California, grown with and without molybdate |
title_full | Metagenomic analysis of intertidal hypersaline microbial mats from Elkhorn Slough, California, grown with and without molybdate |
title_fullStr | Metagenomic analysis of intertidal hypersaline microbial mats from Elkhorn Slough, California, grown with and without molybdate |
title_full_unstemmed | Metagenomic analysis of intertidal hypersaline microbial mats from Elkhorn Slough, California, grown with and without molybdate |
title_short | Metagenomic analysis of intertidal hypersaline microbial mats from Elkhorn Slough, California, grown with and without molybdate |
title_sort | metagenomic analysis of intertidal hypersaline microbial mats from elkhorn slough, california, grown with and without molybdate |
topic | Metagenome Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5688640/ https://www.ncbi.nlm.nih.gov/pubmed/29167704 http://dx.doi.org/10.1186/s40793-017-0279-6 |
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