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A novel 3D imaging system for strawberry phenotyping

BACKGROUND: Accurate and quantitative phenotypic data in plant breeding programmes is vital in breeding to assess the performance of genotypes and to make selections. Traditional strawberry phenotyping relies on the human eye to assess most external fruit quality attributes, which is time-consuming...

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Autores principales: He, Joe Q., Harrison, Richard J., Li, Bo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5688821/
https://www.ncbi.nlm.nih.gov/pubmed/29176998
http://dx.doi.org/10.1186/s13007-017-0243-x
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author He, Joe Q.
Harrison, Richard J.
Li, Bo
author_facet He, Joe Q.
Harrison, Richard J.
Li, Bo
author_sort He, Joe Q.
collection PubMed
description BACKGROUND: Accurate and quantitative phenotypic data in plant breeding programmes is vital in breeding to assess the performance of genotypes and to make selections. Traditional strawberry phenotyping relies on the human eye to assess most external fruit quality attributes, which is time-consuming and subjective. 3D imaging is a promising high-throughput technique that allows multiple external fruit quality attributes to be measured simultaneously. RESULTS: A low cost multi-view stereo (MVS) imaging system was developed, which captured data from 360° around a target strawberry fruit. A 3D point cloud of the sample was derived and analysed with custom-developed software to estimate berry height, length, width, volume, calyx size, colour and achene number. Analysis of these traits in 100 fruits showed good concordance with manual assessment methods. CONCLUSION: This study demonstrates the feasibility of an MVS based 3D imaging system for the rapid and quantitative phenotyping of seven agronomically important external strawberry traits. With further improvement, this method could be applied in strawberry breeding programmes as a cost effective phenotyping technique.
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spelling pubmed-56888212017-11-24 A novel 3D imaging system for strawberry phenotyping He, Joe Q. Harrison, Richard J. Li, Bo Plant Methods Methodology Article BACKGROUND: Accurate and quantitative phenotypic data in plant breeding programmes is vital in breeding to assess the performance of genotypes and to make selections. Traditional strawberry phenotyping relies on the human eye to assess most external fruit quality attributes, which is time-consuming and subjective. 3D imaging is a promising high-throughput technique that allows multiple external fruit quality attributes to be measured simultaneously. RESULTS: A low cost multi-view stereo (MVS) imaging system was developed, which captured data from 360° around a target strawberry fruit. A 3D point cloud of the sample was derived and analysed with custom-developed software to estimate berry height, length, width, volume, calyx size, colour and achene number. Analysis of these traits in 100 fruits showed good concordance with manual assessment methods. CONCLUSION: This study demonstrates the feasibility of an MVS based 3D imaging system for the rapid and quantitative phenotyping of seven agronomically important external strawberry traits. With further improvement, this method could be applied in strawberry breeding programmes as a cost effective phenotyping technique. BioMed Central 2017-11-08 /pmc/articles/PMC5688821/ /pubmed/29176998 http://dx.doi.org/10.1186/s13007-017-0243-x Text en © The Author(s) 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Methodology Article
He, Joe Q.
Harrison, Richard J.
Li, Bo
A novel 3D imaging system for strawberry phenotyping
title A novel 3D imaging system for strawberry phenotyping
title_full A novel 3D imaging system for strawberry phenotyping
title_fullStr A novel 3D imaging system for strawberry phenotyping
title_full_unstemmed A novel 3D imaging system for strawberry phenotyping
title_short A novel 3D imaging system for strawberry phenotyping
title_sort novel 3d imaging system for strawberry phenotyping
topic Methodology Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5688821/
https://www.ncbi.nlm.nih.gov/pubmed/29176998
http://dx.doi.org/10.1186/s13007-017-0243-x
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