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Learning anatomy changes from patient populations to create artificial CT images for voxel‐level validation of deformable image registration
The purpose of this study was to develop an approach to generate artificial computed tomography (CT) images with known deformation by learning the anatomy changes in a patient population for voxel‐level validation of deformable image registration. Using a dataset of CT images representing anatomy ch...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5690226/ https://www.ncbi.nlm.nih.gov/pubmed/26894362 http://dx.doi.org/10.1120/jacmp.v17i1.5888 |
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author | Yu, Z. Henry Kudchadker, Rajat Dong, Lei Zhang, Yongbin Court, Laurence E. Mourtada, Firas Yock, Adam Tucker, Susan L. Yang, Jinzhong |
author_facet | Yu, Z. Henry Kudchadker, Rajat Dong, Lei Zhang, Yongbin Court, Laurence E. Mourtada, Firas Yock, Adam Tucker, Susan L. Yang, Jinzhong |
author_sort | Yu, Z. Henry |
collection | PubMed |
description | The purpose of this study was to develop an approach to generate artificial computed tomography (CT) images with known deformation by learning the anatomy changes in a patient population for voxel‐level validation of deformable image registration. Using a dataset of CT images representing anatomy changes during the course of radiation therapy, we selected a reference image and registered the remaining images to it, either directly or indirectly, using deformable registration. The resulting deformation vector fields (DVFs) represented the anatomy variations in that patient population. The mean deformation, computed from the DVFs, and the most prominent variations, which were captured using principal component analysis (PCA), composed an active shape model that could generate random known deformations with realistic anatomy changes based on those learned from the patient population. This approach was applied to a set of 12 head and neck patients who received intensity‐modulated radiation therapy for validation. Artificial planning CT and daily CT images were generated to simulate a patient with known anatomy changes over the course of treatment and used to validate the deformable image registration between them. These artificial CT images potentially simulated the actual patients' anatomies and also showed realistic anatomy changes between different daily CT images. They were used to successfully validate deformable image registration applied to intrapatient deformation. PACS number: 87.57.nj |
format | Online Article Text |
id | pubmed-5690226 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-56902262018-04-02 Learning anatomy changes from patient populations to create artificial CT images for voxel‐level validation of deformable image registration Yu, Z. Henry Kudchadker, Rajat Dong, Lei Zhang, Yongbin Court, Laurence E. Mourtada, Firas Yock, Adam Tucker, Susan L. Yang, Jinzhong J Appl Clin Med Phys Radiation Oncology Physics The purpose of this study was to develop an approach to generate artificial computed tomography (CT) images with known deformation by learning the anatomy changes in a patient population for voxel‐level validation of deformable image registration. Using a dataset of CT images representing anatomy changes during the course of radiation therapy, we selected a reference image and registered the remaining images to it, either directly or indirectly, using deformable registration. The resulting deformation vector fields (DVFs) represented the anatomy variations in that patient population. The mean deformation, computed from the DVFs, and the most prominent variations, which were captured using principal component analysis (PCA), composed an active shape model that could generate random known deformations with realistic anatomy changes based on those learned from the patient population. This approach was applied to a set of 12 head and neck patients who received intensity‐modulated radiation therapy for validation. Artificial planning CT and daily CT images were generated to simulate a patient with known anatomy changes over the course of treatment and used to validate the deformable image registration between them. These artificial CT images potentially simulated the actual patients' anatomies and also showed realistic anatomy changes between different daily CT images. They were used to successfully validate deformable image registration applied to intrapatient deformation. PACS number: 87.57.nj John Wiley and Sons Inc. 2016-01-08 /pmc/articles/PMC5690226/ /pubmed/26894362 http://dx.doi.org/10.1120/jacmp.v17i1.5888 Text en © 2016 The Authors. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/3.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Radiation Oncology Physics Yu, Z. Henry Kudchadker, Rajat Dong, Lei Zhang, Yongbin Court, Laurence E. Mourtada, Firas Yock, Adam Tucker, Susan L. Yang, Jinzhong Learning anatomy changes from patient populations to create artificial CT images for voxel‐level validation of deformable image registration |
title | Learning anatomy changes from patient populations to create artificial CT images for voxel‐level validation of deformable image registration |
title_full | Learning anatomy changes from patient populations to create artificial CT images for voxel‐level validation of deformable image registration |
title_fullStr | Learning anatomy changes from patient populations to create artificial CT images for voxel‐level validation of deformable image registration |
title_full_unstemmed | Learning anatomy changes from patient populations to create artificial CT images for voxel‐level validation of deformable image registration |
title_short | Learning anatomy changes from patient populations to create artificial CT images for voxel‐level validation of deformable image registration |
title_sort | learning anatomy changes from patient populations to create artificial ct images for voxel‐level validation of deformable image registration |
topic | Radiation Oncology Physics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5690226/ https://www.ncbi.nlm.nih.gov/pubmed/26894362 http://dx.doi.org/10.1120/jacmp.v17i1.5888 |
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