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Balancing a genetic toggle switch by real-time feedback control and periodic forcing

Cybergenetics is a novel field of research aiming at remotely pilot cellular processes in real-time with to leverage the biotechnological potential of synthetic biology. Yet, the control of only a small number of genetic circuits has been tested so far. Here we investigate the control of multistable...

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Autores principales: Lugagne, Jean-Baptiste, Sosa Carrillo, Sebastián, Kirch, Melanie, Köhler, Agnes, Batt, Gregory, Hersen, Pascal
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5693866/
https://www.ncbi.nlm.nih.gov/pubmed/29150615
http://dx.doi.org/10.1038/s41467-017-01498-0
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author Lugagne, Jean-Baptiste
Sosa Carrillo, Sebastián
Kirch, Melanie
Köhler, Agnes
Batt, Gregory
Hersen, Pascal
author_facet Lugagne, Jean-Baptiste
Sosa Carrillo, Sebastián
Kirch, Melanie
Köhler, Agnes
Batt, Gregory
Hersen, Pascal
author_sort Lugagne, Jean-Baptiste
collection PubMed
description Cybergenetics is a novel field of research aiming at remotely pilot cellular processes in real-time with to leverage the biotechnological potential of synthetic biology. Yet, the control of only a small number of genetic circuits has been tested so far. Here we investigate the control of multistable gene regulatory networks, which are ubiquitously found in nature and play critical roles in cell differentiation and decision-making. Using an in silico feedback control loop, we demonstrate that a bistable genetic toggle switch can be dynamically maintained near its unstable equilibrium position for extended periods of time. Importantly, we show that a direct method based on dual periodic forcing is sufficient to simultaneously maintain many cells in this undecided state. These findings pave the way for the control of more complex cell decision-making systems at both the single cell and the population levels, with vast fundamental and biotechnological applications.
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spelling pubmed-56938662017-11-20 Balancing a genetic toggle switch by real-time feedback control and periodic forcing Lugagne, Jean-Baptiste Sosa Carrillo, Sebastián Kirch, Melanie Köhler, Agnes Batt, Gregory Hersen, Pascal Nat Commun Article Cybergenetics is a novel field of research aiming at remotely pilot cellular processes in real-time with to leverage the biotechnological potential of synthetic biology. Yet, the control of only a small number of genetic circuits has been tested so far. Here we investigate the control of multistable gene regulatory networks, which are ubiquitously found in nature and play critical roles in cell differentiation and decision-making. Using an in silico feedback control loop, we demonstrate that a bistable genetic toggle switch can be dynamically maintained near its unstable equilibrium position for extended periods of time. Importantly, we show that a direct method based on dual periodic forcing is sufficient to simultaneously maintain many cells in this undecided state. These findings pave the way for the control of more complex cell decision-making systems at both the single cell and the population levels, with vast fundamental and biotechnological applications. Nature Publishing Group UK 2017-11-17 /pmc/articles/PMC5693866/ /pubmed/29150615 http://dx.doi.org/10.1038/s41467-017-01498-0 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Lugagne, Jean-Baptiste
Sosa Carrillo, Sebastián
Kirch, Melanie
Köhler, Agnes
Batt, Gregory
Hersen, Pascal
Balancing a genetic toggle switch by real-time feedback control and periodic forcing
title Balancing a genetic toggle switch by real-time feedback control and periodic forcing
title_full Balancing a genetic toggle switch by real-time feedback control and periodic forcing
title_fullStr Balancing a genetic toggle switch by real-time feedback control and periodic forcing
title_full_unstemmed Balancing a genetic toggle switch by real-time feedback control and periodic forcing
title_short Balancing a genetic toggle switch by real-time feedback control and periodic forcing
title_sort balancing a genetic toggle switch by real-time feedback control and periodic forcing
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5693866/
https://www.ncbi.nlm.nih.gov/pubmed/29150615
http://dx.doi.org/10.1038/s41467-017-01498-0
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