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Primers and copper responsive promoter design and data of real-time RT-PCR assay in filamentous fungus Trichoderma reesei

This data article contains data related to the research article entitled “Copper-mediated on-off control of gene expression in filamentous fungus Trichoderma reesei” (Wang et al., 2017) [1]. Four kinds of copper responsive promoters were designed. Quantitative PCR (qPCR) was performed to determine r...

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Detalles Bibliográficos
Autores principales: Wang, Wei, Chen, Yumeng, Wei, Dong-Zhi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5694953/
https://www.ncbi.nlm.nih.gov/pubmed/29188230
http://dx.doi.org/10.1016/j.dib.2017.11.018
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author Wang, Wei
Chen, Yumeng
Wei, Dong-Zhi
author_facet Wang, Wei
Chen, Yumeng
Wei, Dong-Zhi
author_sort Wang, Wei
collection PubMed
description This data article contains data related to the research article entitled “Copper-mediated on-off control of gene expression in filamentous fungus Trichoderma reesei” (Wang et al., 2017) [1]. Four kinds of copper responsive promoters were designed. Quantitative PCR (qPCR) was performed to determine relative mRNA levels of red fluorescent protein gene (rfp) extracted from cells grown under different concentrations of CuSO(4). Three deletion vectors were constructed by using a copper-mediated self-excision cassette instead of a xylose-mediated self-excision cassette (Zhang et al., 2016) [2] to knock out xyn1, one of the two major specific endo-β-1,4-xylanases (Rauscher et al., 2006) [3], xyr1, the key transcriptional activator of cellulolytic and xylanolytic genes (Lichius et al., 2015) [4], and ace3, a factor essential for cellulase production (Häkkinen et al., 2014) [5]. This data article reports the primers, vector construction, and qPCR assay.
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spelling pubmed-56949532017-11-29 Primers and copper responsive promoter design and data of real-time RT-PCR assay in filamentous fungus Trichoderma reesei Wang, Wei Chen, Yumeng Wei, Dong-Zhi Data Brief Genetics, Genomics and Molecular Biology This data article contains data related to the research article entitled “Copper-mediated on-off control of gene expression in filamentous fungus Trichoderma reesei” (Wang et al., 2017) [1]. Four kinds of copper responsive promoters were designed. Quantitative PCR (qPCR) was performed to determine relative mRNA levels of red fluorescent protein gene (rfp) extracted from cells grown under different concentrations of CuSO(4). Three deletion vectors were constructed by using a copper-mediated self-excision cassette instead of a xylose-mediated self-excision cassette (Zhang et al., 2016) [2] to knock out xyn1, one of the two major specific endo-β-1,4-xylanases (Rauscher et al., 2006) [3], xyr1, the key transcriptional activator of cellulolytic and xylanolytic genes (Lichius et al., 2015) [4], and ace3, a factor essential for cellulase production (Häkkinen et al., 2014) [5]. This data article reports the primers, vector construction, and qPCR assay. Elsevier 2017-11-07 /pmc/articles/PMC5694953/ /pubmed/29188230 http://dx.doi.org/10.1016/j.dib.2017.11.018 Text en © 2017 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Genetics, Genomics and Molecular Biology
Wang, Wei
Chen, Yumeng
Wei, Dong-Zhi
Primers and copper responsive promoter design and data of real-time RT-PCR assay in filamentous fungus Trichoderma reesei
title Primers and copper responsive promoter design and data of real-time RT-PCR assay in filamentous fungus Trichoderma reesei
title_full Primers and copper responsive promoter design and data of real-time RT-PCR assay in filamentous fungus Trichoderma reesei
title_fullStr Primers and copper responsive promoter design and data of real-time RT-PCR assay in filamentous fungus Trichoderma reesei
title_full_unstemmed Primers and copper responsive promoter design and data of real-time RT-PCR assay in filamentous fungus Trichoderma reesei
title_short Primers and copper responsive promoter design and data of real-time RT-PCR assay in filamentous fungus Trichoderma reesei
title_sort primers and copper responsive promoter design and data of real-time rt-pcr assay in filamentous fungus trichoderma reesei
topic Genetics, Genomics and Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5694953/
https://www.ncbi.nlm.nih.gov/pubmed/29188230
http://dx.doi.org/10.1016/j.dib.2017.11.018
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