Cargando…
Data on RNA-seq analysis of Garcinia mangostana L. seed development
Mangosteen (Garcinia mangostana L.) has exceptional potential for commercial and pharmaceutical applications due to its delicious fruit and medicinal properties. Nevertheless, the molecular mechanism of mangosteen seed development is poorly understood. In this study, we performed transcriptomic anal...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5694954/ https://www.ncbi.nlm.nih.gov/pubmed/29188226 http://dx.doi.org/10.1016/j.dib.2017.11.001 |
_version_ | 1783280224946880512 |
---|---|
author | Mazlan, Othman Abdul-Rahman, Azhani Goh, Hoe-Han Aizat, Wan Mohd Mohd Noor, Normah |
author_facet | Mazlan, Othman Abdul-Rahman, Azhani Goh, Hoe-Han Aizat, Wan Mohd Mohd Noor, Normah |
author_sort | Mazlan, Othman |
collection | PubMed |
description | Mangosteen (Garcinia mangostana L.) has exceptional potential for commercial and pharmaceutical applications due to its delicious fruit and medicinal properties. Nevertheless, the molecular mechanism of mangosteen seed development is poorly understood. In this study, we performed transcriptomic analysis of four seed developmental stages; eight, ten, twelve and fourteen weeks after anthesis. Illumina HiSeq™ 4000 sequencer was used to generate raw data of approximately 68 Gb in size. From 451,495,326 raw reads, 406,143,756 clean reads were obtained. The raw data were uploaded to SRA database and the BioProject ID is PRJNA395504. These data provide the basis for further exploration and understanding of the molecular mechanism in mangosteen seed development. |
format | Online Article Text |
id | pubmed-5694954 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-56949542017-11-29 Data on RNA-seq analysis of Garcinia mangostana L. seed development Mazlan, Othman Abdul-Rahman, Azhani Goh, Hoe-Han Aizat, Wan Mohd Mohd Noor, Normah Data Brief Genetics, Genomics and Molecular Biology Mangosteen (Garcinia mangostana L.) has exceptional potential for commercial and pharmaceutical applications due to its delicious fruit and medicinal properties. Nevertheless, the molecular mechanism of mangosteen seed development is poorly understood. In this study, we performed transcriptomic analysis of four seed developmental stages; eight, ten, twelve and fourteen weeks after anthesis. Illumina HiSeq™ 4000 sequencer was used to generate raw data of approximately 68 Gb in size. From 451,495,326 raw reads, 406,143,756 clean reads were obtained. The raw data were uploaded to SRA database and the BioProject ID is PRJNA395504. These data provide the basis for further exploration and understanding of the molecular mechanism in mangosteen seed development. Elsevier 2017-11-07 /pmc/articles/PMC5694954/ /pubmed/29188226 http://dx.doi.org/10.1016/j.dib.2017.11.001 Text en © 2017 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Genetics, Genomics and Molecular Biology Mazlan, Othman Abdul-Rahman, Azhani Goh, Hoe-Han Aizat, Wan Mohd Mohd Noor, Normah Data on RNA-seq analysis of Garcinia mangostana L. seed development |
title | Data on RNA-seq analysis of Garcinia mangostana L. seed development |
title_full | Data on RNA-seq analysis of Garcinia mangostana L. seed development |
title_fullStr | Data on RNA-seq analysis of Garcinia mangostana L. seed development |
title_full_unstemmed | Data on RNA-seq analysis of Garcinia mangostana L. seed development |
title_short | Data on RNA-seq analysis of Garcinia mangostana L. seed development |
title_sort | data on rna-seq analysis of garcinia mangostana l. seed development |
topic | Genetics, Genomics and Molecular Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5694954/ https://www.ncbi.nlm.nih.gov/pubmed/29188226 http://dx.doi.org/10.1016/j.dib.2017.11.001 |
work_keys_str_mv | AT mazlanothman dataonrnaseqanalysisofgarciniamangostanalseeddevelopment AT abdulrahmanazhani dataonrnaseqanalysisofgarciniamangostanalseeddevelopment AT gohhoehan dataonrnaseqanalysisofgarciniamangostanalseeddevelopment AT aizatwanmohd dataonrnaseqanalysisofgarciniamangostanalseeddevelopment AT mohdnoornormah dataonrnaseqanalysisofgarciniamangostanalseeddevelopment |