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Reduced order modeling and analysis of the human complement system

Complement is an important pathway in innate immunity, inflammation, and many disease processes. However, despite its importance, there are few validated mathematical models of complement activation. In this study, we developed an ensemble of experimentally validated reduced order complement models....

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Detalles Bibliográficos
Autores principales: Sagar, Adithya, Dai, Wei, Minot, Mason, LeCover, Rachel, Varner, Jeffrey D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5695804/
https://www.ncbi.nlm.nih.gov/pubmed/29155837
http://dx.doi.org/10.1371/journal.pone.0187373
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author Sagar, Adithya
Dai, Wei
Minot, Mason
LeCover, Rachel
Varner, Jeffrey D.
author_facet Sagar, Adithya
Dai, Wei
Minot, Mason
LeCover, Rachel
Varner, Jeffrey D.
author_sort Sagar, Adithya
collection PubMed
description Complement is an important pathway in innate immunity, inflammation, and many disease processes. However, despite its importance, there are few validated mathematical models of complement activation. In this study, we developed an ensemble of experimentally validated reduced order complement models. We combined ordinary differential equations with logical rules to produce a compact yet predictive model of complement activation. The model, which described the lectin and alternative pathways, was an order of magnitude smaller than comparable models in the literature. We estimated an ensemble of model parameters from in vitro dynamic measurements of the C3a and C5a complement proteins. Subsequently, we validated the model on unseen C3a and C5a measurements not used for model training. Despite its small size, the model was surprisingly predictive. Global sensitivity and robustness analysis suggested complement was robust to any single therapeutic intervention. Only the simultaneous knockdown of both C3 and C5 consistently reduced C3a and C5a formation from all pathways. Taken together, we developed a validated mathematical model of complement activation that was computationally inexpensive, and could easily be incorporated into pre-existing or new pharmacokinetic models of immune system function. The model described experimental data, and predicted the need for multiple points of therapeutic intervention to fully disrupt complement activation.
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spelling pubmed-56958042017-11-30 Reduced order modeling and analysis of the human complement system Sagar, Adithya Dai, Wei Minot, Mason LeCover, Rachel Varner, Jeffrey D. PLoS One Research Article Complement is an important pathway in innate immunity, inflammation, and many disease processes. However, despite its importance, there are few validated mathematical models of complement activation. In this study, we developed an ensemble of experimentally validated reduced order complement models. We combined ordinary differential equations with logical rules to produce a compact yet predictive model of complement activation. The model, which described the lectin and alternative pathways, was an order of magnitude smaller than comparable models in the literature. We estimated an ensemble of model parameters from in vitro dynamic measurements of the C3a and C5a complement proteins. Subsequently, we validated the model on unseen C3a and C5a measurements not used for model training. Despite its small size, the model was surprisingly predictive. Global sensitivity and robustness analysis suggested complement was robust to any single therapeutic intervention. Only the simultaneous knockdown of both C3 and C5 consistently reduced C3a and C5a formation from all pathways. Taken together, we developed a validated mathematical model of complement activation that was computationally inexpensive, and could easily be incorporated into pre-existing or new pharmacokinetic models of immune system function. The model described experimental data, and predicted the need for multiple points of therapeutic intervention to fully disrupt complement activation. Public Library of Science 2017-11-20 /pmc/articles/PMC5695804/ /pubmed/29155837 http://dx.doi.org/10.1371/journal.pone.0187373 Text en © 2017 Sagar et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Sagar, Adithya
Dai, Wei
Minot, Mason
LeCover, Rachel
Varner, Jeffrey D.
Reduced order modeling and analysis of the human complement system
title Reduced order modeling and analysis of the human complement system
title_full Reduced order modeling and analysis of the human complement system
title_fullStr Reduced order modeling and analysis of the human complement system
title_full_unstemmed Reduced order modeling and analysis of the human complement system
title_short Reduced order modeling and analysis of the human complement system
title_sort reduced order modeling and analysis of the human complement system
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5695804/
https://www.ncbi.nlm.nih.gov/pubmed/29155837
http://dx.doi.org/10.1371/journal.pone.0187373
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