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Quantitative label-free proteomic analysis of human urine to identify novel candidate protein biomarkers for schistosomiasis

BACKGROUND: Schistosomiasis is a chronic neglected tropical disease that is characterized by continued inflammatory challenges to the exposed population and it has been established as a possible risk factor in the aetiology of bladder cancer. Improved diagnosis of schistosomiasis and its associated...

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Autores principales: Onile, Olugbenga Samson, Calder, Bridget, Soares, Nelson C., Anumudu, Chiaka I., Blackburn, Jonathan M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5695849/
https://www.ncbi.nlm.nih.gov/pubmed/29117212
http://dx.doi.org/10.1371/journal.pntd.0006045
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author Onile, Olugbenga Samson
Calder, Bridget
Soares, Nelson C.
Anumudu, Chiaka I.
Blackburn, Jonathan M.
author_facet Onile, Olugbenga Samson
Calder, Bridget
Soares, Nelson C.
Anumudu, Chiaka I.
Blackburn, Jonathan M.
author_sort Onile, Olugbenga Samson
collection PubMed
description BACKGROUND: Schistosomiasis is a chronic neglected tropical disease that is characterized by continued inflammatory challenges to the exposed population and it has been established as a possible risk factor in the aetiology of bladder cancer. Improved diagnosis of schistosomiasis and its associated pathology is possible through mass spectrometry to identify biomarkers among the infected population, which will influence early detection of the disease and its subtle morbidity. METHODOLOGY: A high-throughput proteomic approach was used to analyse human urine samples for 49 volunteers from Eggua, a schistosomiasis endemic community in South-West, Nigeria. The individuals were previously screened for Schistosoma haematobium and structural bladder pathologies via microscopy and ultrasonography respectively. Samples were categorised into schistosomiasis, schistosomiasis with bladder pathology, bladder pathology, and a normal healthy control group. These samples were analysed to identify potential protein biomarkers. RESULTS: A total of 1306 proteins and 9701 unique peptides were observed in this study (FDR = 0.01). Fifty-four human proteins were found to be potential biomarkers for schistosomiasis and bladder pathologies due to schistosomiasis by label-free quantitative comparison between groups. Thirty-six (36) parasite-derived potential biomarkers were also identified, which include some existing putative schistosomiasis biomarkers that have been previously reported. Some of these proteins include Elongation factor 1 alpha, phosphopyruvate hydratase, histone H4 and heat shock proteins (HSP 60, HSP 70). CONCLUSION: These findings provide an in-depth analysis of potential schistosoma and human host protein biomarkers for diagnosis of chronic schistosomiasis caused by Schistosoma haematobium and its pathogenesis.
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spelling pubmed-56958492017-11-30 Quantitative label-free proteomic analysis of human urine to identify novel candidate protein biomarkers for schistosomiasis Onile, Olugbenga Samson Calder, Bridget Soares, Nelson C. Anumudu, Chiaka I. Blackburn, Jonathan M. PLoS Negl Trop Dis Research Article BACKGROUND: Schistosomiasis is a chronic neglected tropical disease that is characterized by continued inflammatory challenges to the exposed population and it has been established as a possible risk factor in the aetiology of bladder cancer. Improved diagnosis of schistosomiasis and its associated pathology is possible through mass spectrometry to identify biomarkers among the infected population, which will influence early detection of the disease and its subtle morbidity. METHODOLOGY: A high-throughput proteomic approach was used to analyse human urine samples for 49 volunteers from Eggua, a schistosomiasis endemic community in South-West, Nigeria. The individuals were previously screened for Schistosoma haematobium and structural bladder pathologies via microscopy and ultrasonography respectively. Samples were categorised into schistosomiasis, schistosomiasis with bladder pathology, bladder pathology, and a normal healthy control group. These samples were analysed to identify potential protein biomarkers. RESULTS: A total of 1306 proteins and 9701 unique peptides were observed in this study (FDR = 0.01). Fifty-four human proteins were found to be potential biomarkers for schistosomiasis and bladder pathologies due to schistosomiasis by label-free quantitative comparison between groups. Thirty-six (36) parasite-derived potential biomarkers were also identified, which include some existing putative schistosomiasis biomarkers that have been previously reported. Some of these proteins include Elongation factor 1 alpha, phosphopyruvate hydratase, histone H4 and heat shock proteins (HSP 60, HSP 70). CONCLUSION: These findings provide an in-depth analysis of potential schistosoma and human host protein biomarkers for diagnosis of chronic schistosomiasis caused by Schistosoma haematobium and its pathogenesis. Public Library of Science 2017-11-08 /pmc/articles/PMC5695849/ /pubmed/29117212 http://dx.doi.org/10.1371/journal.pntd.0006045 Text en © 2017 Onile et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Onile, Olugbenga Samson
Calder, Bridget
Soares, Nelson C.
Anumudu, Chiaka I.
Blackburn, Jonathan M.
Quantitative label-free proteomic analysis of human urine to identify novel candidate protein biomarkers for schistosomiasis
title Quantitative label-free proteomic analysis of human urine to identify novel candidate protein biomarkers for schistosomiasis
title_full Quantitative label-free proteomic analysis of human urine to identify novel candidate protein biomarkers for schistosomiasis
title_fullStr Quantitative label-free proteomic analysis of human urine to identify novel candidate protein biomarkers for schistosomiasis
title_full_unstemmed Quantitative label-free proteomic analysis of human urine to identify novel candidate protein biomarkers for schistosomiasis
title_short Quantitative label-free proteomic analysis of human urine to identify novel candidate protein biomarkers for schistosomiasis
title_sort quantitative label-free proteomic analysis of human urine to identify novel candidate protein biomarkers for schistosomiasis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5695849/
https://www.ncbi.nlm.nih.gov/pubmed/29117212
http://dx.doi.org/10.1371/journal.pntd.0006045
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