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Genome-wide identification of cancer/testis genes and their association with prognosis in a pan-cancer analysis
Cancer/testis (CT) genes are excellent candidates for cancer immunotherapies because of their restrict expression in normal tissues and the capacity to elicit an immune response when expressed in tumor cells. In this study, we provide a genome-wide screen for CT genes with the identification of 745...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals LLC
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5696236/ https://www.ncbi.nlm.nih.gov/pubmed/29190970 http://dx.doi.org/10.18632/oncotarget.21715 |
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author | da Silva, Vandeclecio Lira Fonseca, André Faustino Fonseca, Marbella da Silva, Thayna Emilia Coelho, Ana Carolina Kroll, José Eduardo de Souza, Jorge Estefano Santana Stransky, Beatriz de Souza, Gustavo Antonio de Souza, Sandro José |
author_facet | da Silva, Vandeclecio Lira Fonseca, André Faustino Fonseca, Marbella da Silva, Thayna Emilia Coelho, Ana Carolina Kroll, José Eduardo de Souza, Jorge Estefano Santana Stransky, Beatriz de Souza, Gustavo Antonio de Souza, Sandro José |
author_sort | da Silva, Vandeclecio Lira |
collection | PubMed |
description | Cancer/testis (CT) genes are excellent candidates for cancer immunotherapies because of their restrict expression in normal tissues and the capacity to elicit an immune response when expressed in tumor cells. In this study, we provide a genome-wide screen for CT genes with the identification of 745 putative CT genes. Comparison with a set of known CT genes shows that 201 new CT genes were identified. Integration of gene expression and clinical data led us to identify dozens of CT genes associated with either good or poor prognosis. For the CT genes related to good prognosis, we show that there is a direct relationship between CT gene expression and a signal for CD8+ cells infiltration for some tumor types, especially melanoma. |
format | Online Article Text |
id | pubmed-5696236 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Impact Journals LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-56962362017-11-29 Genome-wide identification of cancer/testis genes and their association with prognosis in a pan-cancer analysis da Silva, Vandeclecio Lira Fonseca, André Faustino Fonseca, Marbella da Silva, Thayna Emilia Coelho, Ana Carolina Kroll, José Eduardo de Souza, Jorge Estefano Santana Stransky, Beatriz de Souza, Gustavo Antonio de Souza, Sandro José Oncotarget Research Paper Cancer/testis (CT) genes are excellent candidates for cancer immunotherapies because of their restrict expression in normal tissues and the capacity to elicit an immune response when expressed in tumor cells. In this study, we provide a genome-wide screen for CT genes with the identification of 745 putative CT genes. Comparison with a set of known CT genes shows that 201 new CT genes were identified. Integration of gene expression and clinical data led us to identify dozens of CT genes associated with either good or poor prognosis. For the CT genes related to good prognosis, we show that there is a direct relationship between CT gene expression and a signal for CD8+ cells infiltration for some tumor types, especially melanoma. Impact Journals LLC 2017-10-10 /pmc/articles/PMC5696236/ /pubmed/29190970 http://dx.doi.org/10.18632/oncotarget.21715 Text en Copyright: © 2017 da Silva et al. http://creativecommons.org/licenses/by/3.0/ This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) (CC-BY), which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Research Paper da Silva, Vandeclecio Lira Fonseca, André Faustino Fonseca, Marbella da Silva, Thayna Emilia Coelho, Ana Carolina Kroll, José Eduardo de Souza, Jorge Estefano Santana Stransky, Beatriz de Souza, Gustavo Antonio de Souza, Sandro José Genome-wide identification of cancer/testis genes and their association with prognosis in a pan-cancer analysis |
title | Genome-wide identification of cancer/testis genes and their association with prognosis in a pan-cancer analysis |
title_full | Genome-wide identification of cancer/testis genes and their association with prognosis in a pan-cancer analysis |
title_fullStr | Genome-wide identification of cancer/testis genes and their association with prognosis in a pan-cancer analysis |
title_full_unstemmed | Genome-wide identification of cancer/testis genes and their association with prognosis in a pan-cancer analysis |
title_short | Genome-wide identification of cancer/testis genes and their association with prognosis in a pan-cancer analysis |
title_sort | genome-wide identification of cancer/testis genes and their association with prognosis in a pan-cancer analysis |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5696236/ https://www.ncbi.nlm.nih.gov/pubmed/29190970 http://dx.doi.org/10.18632/oncotarget.21715 |
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