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Field sampling marine plankton for biodiscovery

Microalgae and plankton can be a rich source of bioactivity. However, induction of secondary metabolite production in lab conditions can be difficult. One simple way of bypassing this issue is to collect biomass in the field and screen for bioactivity. Therefore, bulk net samples from three areas al...

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Autores principales: Ingebrigtsen, Richard Andre, Hansen, Espen, Andersen, Jeanette Hammer, Eilertsen, Hans Christian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5696511/
https://www.ncbi.nlm.nih.gov/pubmed/29158560
http://dx.doi.org/10.1038/s41598-017-15980-8
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author Ingebrigtsen, Richard Andre
Hansen, Espen
Andersen, Jeanette Hammer
Eilertsen, Hans Christian
author_facet Ingebrigtsen, Richard Andre
Hansen, Espen
Andersen, Jeanette Hammer
Eilertsen, Hans Christian
author_sort Ingebrigtsen, Richard Andre
collection PubMed
description Microalgae and plankton can be a rich source of bioactivity. However, induction of secondary metabolite production in lab conditions can be difficult. One simple way of bypassing this issue is to collect biomass in the field and screen for bioactivity. Therefore, bulk net samples from three areas along the coast of northern Norway and Spitsbergen were collected, extracted and fractionated. Biomass samples from a strain of a mass-cultivated diatom Porosira glacialis were used as a reference for comparison to field samples. Screening for bioactivity was performed with 13 assays within four therapeutic areas: antibacterial, anticancer, antidiabetes and antioxidation. We analysed the metabolic profiles of the samples using high resolution - mass spectroscopy (HR-MS). Principal component analysis showed a marked difference in metabolite profiles between the field samples and the photobioreactor culture; furthermore, the number of active fractions and extent of bioactivity was different in the field compared to the photobioreactor samples. We found varying levels of bioactivity in all samples, indicating that complex marine field samples could be used to investigate bioactivities from otherwise inaccessible sources. Furthermore, we hypothesize that metabolic pathways that would otherwise been silent under controlled growth in monocultures, might have been activated in the field samples.
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spelling pubmed-56965112017-11-29 Field sampling marine plankton for biodiscovery Ingebrigtsen, Richard Andre Hansen, Espen Andersen, Jeanette Hammer Eilertsen, Hans Christian Sci Rep Article Microalgae and plankton can be a rich source of bioactivity. However, induction of secondary metabolite production in lab conditions can be difficult. One simple way of bypassing this issue is to collect biomass in the field and screen for bioactivity. Therefore, bulk net samples from three areas along the coast of northern Norway and Spitsbergen were collected, extracted and fractionated. Biomass samples from a strain of a mass-cultivated diatom Porosira glacialis were used as a reference for comparison to field samples. Screening for bioactivity was performed with 13 assays within four therapeutic areas: antibacterial, anticancer, antidiabetes and antioxidation. We analysed the metabolic profiles of the samples using high resolution - mass spectroscopy (HR-MS). Principal component analysis showed a marked difference in metabolite profiles between the field samples and the photobioreactor culture; furthermore, the number of active fractions and extent of bioactivity was different in the field compared to the photobioreactor samples. We found varying levels of bioactivity in all samples, indicating that complex marine field samples could be used to investigate bioactivities from otherwise inaccessible sources. Furthermore, we hypothesize that metabolic pathways that would otherwise been silent under controlled growth in monocultures, might have been activated in the field samples. Nature Publishing Group UK 2017-11-20 /pmc/articles/PMC5696511/ /pubmed/29158560 http://dx.doi.org/10.1038/s41598-017-15980-8 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Ingebrigtsen, Richard Andre
Hansen, Espen
Andersen, Jeanette Hammer
Eilertsen, Hans Christian
Field sampling marine plankton for biodiscovery
title Field sampling marine plankton for biodiscovery
title_full Field sampling marine plankton for biodiscovery
title_fullStr Field sampling marine plankton for biodiscovery
title_full_unstemmed Field sampling marine plankton for biodiscovery
title_short Field sampling marine plankton for biodiscovery
title_sort field sampling marine plankton for biodiscovery
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5696511/
https://www.ncbi.nlm.nih.gov/pubmed/29158560
http://dx.doi.org/10.1038/s41598-017-15980-8
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