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Field sampling marine plankton for biodiscovery
Microalgae and plankton can be a rich source of bioactivity. However, induction of secondary metabolite production in lab conditions can be difficult. One simple way of bypassing this issue is to collect biomass in the field and screen for bioactivity. Therefore, bulk net samples from three areas al...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5696511/ https://www.ncbi.nlm.nih.gov/pubmed/29158560 http://dx.doi.org/10.1038/s41598-017-15980-8 |
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author | Ingebrigtsen, Richard Andre Hansen, Espen Andersen, Jeanette Hammer Eilertsen, Hans Christian |
author_facet | Ingebrigtsen, Richard Andre Hansen, Espen Andersen, Jeanette Hammer Eilertsen, Hans Christian |
author_sort | Ingebrigtsen, Richard Andre |
collection | PubMed |
description | Microalgae and plankton can be a rich source of bioactivity. However, induction of secondary metabolite production in lab conditions can be difficult. One simple way of bypassing this issue is to collect biomass in the field and screen for bioactivity. Therefore, bulk net samples from three areas along the coast of northern Norway and Spitsbergen were collected, extracted and fractionated. Biomass samples from a strain of a mass-cultivated diatom Porosira glacialis were used as a reference for comparison to field samples. Screening for bioactivity was performed with 13 assays within four therapeutic areas: antibacterial, anticancer, antidiabetes and antioxidation. We analysed the metabolic profiles of the samples using high resolution - mass spectroscopy (HR-MS). Principal component analysis showed a marked difference in metabolite profiles between the field samples and the photobioreactor culture; furthermore, the number of active fractions and extent of bioactivity was different in the field compared to the photobioreactor samples. We found varying levels of bioactivity in all samples, indicating that complex marine field samples could be used to investigate bioactivities from otherwise inaccessible sources. Furthermore, we hypothesize that metabolic pathways that would otherwise been silent under controlled growth in monocultures, might have been activated in the field samples. |
format | Online Article Text |
id | pubmed-5696511 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-56965112017-11-29 Field sampling marine plankton for biodiscovery Ingebrigtsen, Richard Andre Hansen, Espen Andersen, Jeanette Hammer Eilertsen, Hans Christian Sci Rep Article Microalgae and plankton can be a rich source of bioactivity. However, induction of secondary metabolite production in lab conditions can be difficult. One simple way of bypassing this issue is to collect biomass in the field and screen for bioactivity. Therefore, bulk net samples from three areas along the coast of northern Norway and Spitsbergen were collected, extracted and fractionated. Biomass samples from a strain of a mass-cultivated diatom Porosira glacialis were used as a reference for comparison to field samples. Screening for bioactivity was performed with 13 assays within four therapeutic areas: antibacterial, anticancer, antidiabetes and antioxidation. We analysed the metabolic profiles of the samples using high resolution - mass spectroscopy (HR-MS). Principal component analysis showed a marked difference in metabolite profiles between the field samples and the photobioreactor culture; furthermore, the number of active fractions and extent of bioactivity was different in the field compared to the photobioreactor samples. We found varying levels of bioactivity in all samples, indicating that complex marine field samples could be used to investigate bioactivities from otherwise inaccessible sources. Furthermore, we hypothesize that metabolic pathways that would otherwise been silent under controlled growth in monocultures, might have been activated in the field samples. Nature Publishing Group UK 2017-11-20 /pmc/articles/PMC5696511/ /pubmed/29158560 http://dx.doi.org/10.1038/s41598-017-15980-8 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Ingebrigtsen, Richard Andre Hansen, Espen Andersen, Jeanette Hammer Eilertsen, Hans Christian Field sampling marine plankton for biodiscovery |
title | Field sampling marine plankton for biodiscovery |
title_full | Field sampling marine plankton for biodiscovery |
title_fullStr | Field sampling marine plankton for biodiscovery |
title_full_unstemmed | Field sampling marine plankton for biodiscovery |
title_short | Field sampling marine plankton for biodiscovery |
title_sort | field sampling marine plankton for biodiscovery |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5696511/ https://www.ncbi.nlm.nih.gov/pubmed/29158560 http://dx.doi.org/10.1038/s41598-017-15980-8 |
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