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SpikingLab: modelling agents controlled by Spiking Neural Networks in Netlogo

The scientific interest attracted by Spiking Neural Networks (SNN) has lead to the development of tools for the simulation and study of neuronal dynamics ranging from phenomenological models to the more sophisticated and biologically accurate Hodgkin-and-Huxley-based and multi-compartmental models....

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Autores principales: Jimenez-Romero, Cristian, Johnson, Jeffrey
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer London 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5700240/
https://www.ncbi.nlm.nih.gov/pubmed/29213189
http://dx.doi.org/10.1007/s00521-016-2398-1
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author Jimenez-Romero, Cristian
Johnson, Jeffrey
author_facet Jimenez-Romero, Cristian
Johnson, Jeffrey
author_sort Jimenez-Romero, Cristian
collection PubMed
description The scientific interest attracted by Spiking Neural Networks (SNN) has lead to the development of tools for the simulation and study of neuronal dynamics ranging from phenomenological models to the more sophisticated and biologically accurate Hodgkin-and-Huxley-based and multi-compartmental models. However, despite the multiple features offered by neural modelling tools, their integration with environments for the simulation of robots and agents can be challenging and time consuming. The implementation of artificial neural circuits to control robots generally involves the following tasks: (1) understanding the simulation tools, (2) creating the neural circuit in the neural simulator, (3) linking the simulated neural circuit with the environment of the agent and (4) programming the appropriate interface in the robot or agent to use the neural controller. The accomplishment of the above-mentioned tasks can be challenging, especially for undergraduate students or novice researchers. This paper presents an alternative tool which facilitates the simulation of simple SNN circuits using the multi-agent simulation and the programming environment Netlogo (educational software that simplifies the study and experimentation of complex systems). The engine proposed and implemented in Netlogo for the simulation of a functional model of SNN is a simplification of integrate and fire (I&F) models. The characteristics of the engine (including neuronal dynamics, STDP learning and synaptic delay) are demonstrated through the implementation of an agent representing an artificial insect controlled by a simple neural circuit. The setup of the experiment and its outcomes are described in this work.
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spelling pubmed-57002402017-12-04 SpikingLab: modelling agents controlled by Spiking Neural Networks in Netlogo Jimenez-Romero, Cristian Johnson, Jeffrey Neural Comput Appl Original Article The scientific interest attracted by Spiking Neural Networks (SNN) has lead to the development of tools for the simulation and study of neuronal dynamics ranging from phenomenological models to the more sophisticated and biologically accurate Hodgkin-and-Huxley-based and multi-compartmental models. However, despite the multiple features offered by neural modelling tools, their integration with environments for the simulation of robots and agents can be challenging and time consuming. The implementation of artificial neural circuits to control robots generally involves the following tasks: (1) understanding the simulation tools, (2) creating the neural circuit in the neural simulator, (3) linking the simulated neural circuit with the environment of the agent and (4) programming the appropriate interface in the robot or agent to use the neural controller. The accomplishment of the above-mentioned tasks can be challenging, especially for undergraduate students or novice researchers. This paper presents an alternative tool which facilitates the simulation of simple SNN circuits using the multi-agent simulation and the programming environment Netlogo (educational software that simplifies the study and experimentation of complex systems). The engine proposed and implemented in Netlogo for the simulation of a functional model of SNN is a simplification of integrate and fire (I&F) models. The characteristics of the engine (including neuronal dynamics, STDP learning and synaptic delay) are demonstrated through the implementation of an agent representing an artificial insect controlled by a simple neural circuit. The setup of the experiment and its outcomes are described in this work. Springer London 2016-06-07 2017 /pmc/articles/PMC5700240/ /pubmed/29213189 http://dx.doi.org/10.1007/s00521-016-2398-1 Text en © The Author(s) 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Original Article
Jimenez-Romero, Cristian
Johnson, Jeffrey
SpikingLab: modelling agents controlled by Spiking Neural Networks in Netlogo
title SpikingLab: modelling agents controlled by Spiking Neural Networks in Netlogo
title_full SpikingLab: modelling agents controlled by Spiking Neural Networks in Netlogo
title_fullStr SpikingLab: modelling agents controlled by Spiking Neural Networks in Netlogo
title_full_unstemmed SpikingLab: modelling agents controlled by Spiking Neural Networks in Netlogo
title_short SpikingLab: modelling agents controlled by Spiking Neural Networks in Netlogo
title_sort spikinglab: modelling agents controlled by spiking neural networks in netlogo
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5700240/
https://www.ncbi.nlm.nih.gov/pubmed/29213189
http://dx.doi.org/10.1007/s00521-016-2398-1
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