Cargando…

Identification and analysis of seven effector protein families with different adaptive and evolutionary histories in plant-associated members of the Xanthomonadaceae

The Xanthomonadaceae family consists of species of non-pathogenic and pathogenic γ-proteobacteria that infect different hosts, including humans and plants. In this study, we performed a comparative analysis using 69 fully sequenced genomes belonging to this family, with a focus on identifying protei...

Descripción completa

Detalles Bibliográficos
Autores principales:	Assis, Renata de A. B., Polloni, Lorraine Cristina, Patané, José S. L., Thakur, Shalabh, Felestrino, Érica B., Diaz-Caballero, Julio, Digiampietri, Luciano Antonio, Goulart, Luiz Ricardo, Almeida, Nalvo F., Nascimento, Rafael, Dandekar, Abhaya M., Zaini, Paulo A., Setubal, João C., Guttman, David S., Moreira, Leandro Marcio
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group UK 2017
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5700972/ https://www.ncbi.nlm.nih.gov/pubmed/29170530 http://dx.doi.org/10.1038/s41598-017-16325-1

Ejemplares similares

Analyses of Seven New Genomes of Xanthomonas citri pv. aurantifolii Strains, Causative Agents of Citrus Canker B and C, Show a Reduced Repertoire of Pathogenicity-Related Genes
por: Fonseca, Natasha Peixoto, et al.
Publicado: (2019)

Proteome Analysis of Walnut Bacterial Blight Disease
por: H. D. Sagawa, Cíntia, et al.
Publicado: (2020)

The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae
por: Pieretti, Isabelle, et al.
Publicado: (2009)

XAC4296 Is a Multifunctional and Exclusive Xanthomonadaceae Gene Containing a Fusion of Lytic Transglycosylase and Epimerase Domains
por: de Oliveira, Amanda C. P., et al.
Publicado: (2022)

Origin and diversification of Xanthomonas citri subsp. citri pathotypes revealed by inclusive phylogenomic, dating, and biogeographic analyses
por: Patané, José S. L., et al.
Publicado: (2019)

Sequence/structural analysis of xylem proteome emphasizes pathogenesis-related proteins, chitinases and β-1, 3-glucanases as key players in grapevine defense against Xylella fastidiosa
por: Chakraborty, Sandeep, et al.
Publicado: (2016)

Whole-Genome Sequencing of Xanthomonadaceae Strain Alg18-2.2, Isolated from the Saline Lake Gudzhirganskoe in the Republic of Buryatia, Russia
por: Karlyshev, Andrey V., et al.
Publicado: (2019)

Molecular Profiling of Pierce’s Disease Outlines the Response Circuitry of Vitis vinifera to Xylella fastidiosa Infection
por: Zaini, Paulo A., et al.
Publicado: (2018)

A De-Novo Genome Analysis Pipeline (DeNoGAP) for large-scale comparative prokaryotic genomics studies
por: Thakur, Shalabh, et al.
Publicado: (2016)

CLAME: a new alignment-based binning algorithm allows the genomic description of a novel Xanthomonadaceae from the Colombian Andes
por: Benavides, Andres, et al.
Publicado: (2018)

A Secreted Chorismate Mutase from Xanthomonas arboricola pv. juglandis Attenuates Virulence and Walnut Blight Symptoms
por: Assis, Renata de A. B., et al.
Publicado: (2021)

Gene Tags Assessment by Comparative Genomics (GTACG): A User-Friendly Framework for Bacterial Comparative Genomics
por: Santiago, Caio Rafael do Nascimento, et al.
Publicado: (2019)

Detection and identification of Xanthomonas pathotypes associated with citrus diseases using comparative genomics and multiplex PCR
por: Fonseca, Natasha P., et al.
Publicado: (2019)

Antimicrobial activity of Epsilon-Poly-l-lysine against phytopathogenic bacteria
por: Rodrigues, Bárbara, et al.
Publicado: (2020)

Phylogenomics of Xanthomonas field strains infecting pepper and tomato reveals diversity in effector repertoires and identifies determinants of host specificity
por: Schwartz, Allison R., et al.
Publicado: (2015)

Deep Learning Neural Network Prediction Method Improves Proteome Profiling of Vascular Sap of Grapevines during Pierce’s Disease Development
por: Helena Duarte Sagawa, Cíntia, et al.
Publicado: (2020)

Complete genome sequence and analysis of Alcaligenes faecalis strain Mc250, a new potential plant bioinoculant
por: Felestrino, Érica Barbosa, et al.
Publicado: (2020)

A Component of the Xanthomonadaceae Type IV Secretion System Combines a VirB7 Motif with a N0 Domain Found in Outer Membrane Transport Proteins
por: Souza, Diorge P., et al.
Publicado: (2011)

A Guild-Based Protocol to Target Potential Natural Enemies of Philaenus spumarius (Hemiptera: Aphrophoridae), a Vector of Xylella fastidiosa (Xanthomonadaceae): A Case Study with Spiders in the Olive Grove
por: Benhadi-Marín, Jacinto, et al.
Publicado: (2020)

Complete Genome Sequence of Xanthomonas arboricola pv. juglandis 417, a Copper-Resistant Strain Isolated from Juglans regia L.
por: Pereira, Ulisses P., et al.
Publicado: (2015)

Genome-Wide Profiling and Phylogenetic Analysis of the SWEET Sugar Transporter Gene Family in Walnut and Their Lack of Responsiveness to Xanthomonas arboricola pv. juglandis Infection
por: Jiang, Shijiao, et al.
Publicado: (2020)

Proteomics-based identification of differentially abundant proteins reveals adaptation mechanisms of Xanthomonas citri subsp. citri during Citrus sinensis infection
por: Moreira, Leandro M., et al.
Publicado: (2017)

Genetic Mechanisms of the Devious Intruder Candidatus Liberibacter in Citrus
por: Martinelli, Federico, et al.
Publicado: (2017)

Trans-Graft Protection Against Pierce’s Disease Mediated by Transgenic Grapevine Rootstocks
por: Dandekar, Abhaya M., et al.
Publicado: (2019)

Xylella fastidiosa subsp. pauca Strains Fb7 and 9a5c from Citrus Display Differential Behavior, Secretome, and Plant Virulence
por: de Souza, Jessica Brito, et al.
Publicado: (2020)

PAGAL - Properties and corresponding graphics of alpha helical structures in proteins
por: Chakraborty, Sandeep, et al.
Publicado: (2014)

The Secreted Protease PrtA Controls Cell Growth, Biofilm Formation and Pathogenicity in Xylella fastidiosa
por: Gouran, Hossein, et al.
Publicado: (2016)

Comparative Proteomic Analysis of Walnut (Juglans regia L.) Pellicle Tissues Reveals the Regulation of Nut Quality Attributes
por: Zaini, Paulo A., et al.
Publicado: (2020)

Identification and characterization of putative Aeromonas spp. T3SS effectors
por: Rangel, Luiz Thiberio, et al.
Publicado: (2019)

Comparative Genomics of Xylella fastidiosa Explores Candidate Host-Specificity Determinants and Expands the Known Repertoire of Mobile Genetic Elements and Immunity Systems
por: Uceda-Campos, Guillermo, et al.
Publicado: (2022)

The PDB database is a rich source of alpha-helical anti-microbial peptides to combat disease causing pathogens
por: Chakraborty, Sandeep, et al.
Publicado: (2015)

Proteomics of effector-triggered immunity (ETI) in plants
por: Hurley, Brenden, et al.
Publicado: (2014)

Genomic screens identify a new phytobacterial microbe-associated molecular pattern and the cognate Arabidopsis receptor-like kinase that mediates its immune elicitation
por: Mott, G. Adam, et al.
Publicado: (2016)

Recombination of ecologically and evolutionarily significant loci maintains genetic cohesion in the Pseudomonas syringae species complex
por: Dillon, Marcus M., et al.
Publicado: (2019)

CastorDB: a comprehensive knowledge base for Ricinus communis
por: Thakur, Shalabh, et al.
Publicado: (2011)

Characterizing alpha helical properties of Ebola viral proteins as potential targets for inhibition of alpha-helix mediated protein-protein interactions
por: Chakraborty, Sandeep, et al.
Publicado: (2015)

YeATSAM analysis of the walnut and chickpea transcriptome reveals key genes undetected by current annotation tools
por: Chakraborty, Sandeep, et al.
Publicado: (2016)

Serratia liquefaciens FG3 isolated from a metallophyte plant sheds light on the evolution and mechanisms of adaptive traits in extreme environments
por: Caneschi, Washington Luiz, et al.
Publicado: (2019)

The different effector function capabilities of the seven equine IgG subclasses have implications for vaccine strategies
por: Lewis, Melanie J., et al.
Publicado: (2008)

The Arabidopsis effector-triggered immunity landscape is conserved in oilseed crops
por: Breit-McNally, Clare, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_l26b0hc2u93d82bnmgsfgbli10