Cargando…

The dynamics of intracellular water constrains glycolytic oscillations in Saccharomyces cerevisiae

We explored the dynamic coupling of intracellular water with metabolism in yeast cells. Using the polarity-sensitive probe 6-acetyl-2-dimethylaminonaphthalene (ACDAN), we show that glycolytic oscillations in the yeast S. cerevisiae BY4743 wild-type strain are coupled to the generalized polarization...

Descripción completa

Detalles Bibliográficos
Autores principales: Thoke, Henrik S., Thorsteinsson, Sigmundur, Stock, Roberto P., Bagatolli, Luis A., Olsen, Lars F.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5701229/
https://www.ncbi.nlm.nih.gov/pubmed/29176686
http://dx.doi.org/10.1038/s41598-017-16442-x
_version_ 1783281297969381376
author Thoke, Henrik S.
Thorsteinsson, Sigmundur
Stock, Roberto P.
Bagatolli, Luis A.
Olsen, Lars F.
author_facet Thoke, Henrik S.
Thorsteinsson, Sigmundur
Stock, Roberto P.
Bagatolli, Luis A.
Olsen, Lars F.
author_sort Thoke, Henrik S.
collection PubMed
description We explored the dynamic coupling of intracellular water with metabolism in yeast cells. Using the polarity-sensitive probe 6-acetyl-2-dimethylaminonaphthalene (ACDAN), we show that glycolytic oscillations in the yeast S. cerevisiae BY4743 wild-type strain are coupled to the generalized polarization (GP) function of ACDAN, which measures the physical state of intracellular water. We analysed the oscillatory dynamics in wild type and 24 mutant strains with mutations in many different enzymes and proteins. Using fluorescence spectroscopy, we measured the amplitude and frequency of the metabolic oscillations and ACDAN GP in the resting state of all 25 strains. The results showed that there is a lower and an upper threshold of ACDAN GP, beyond which oscillations do not occur. This critical GP range is also phenomenologically linked to the occurrence of oscillations when cells are grown at different temperatures. Furthermore, the link between glycolytic oscillations and the ACDAN GP value also holds when ATP synthesis or the integrity of the cell cytoskeleton is perturbed. Our results represent the first demonstration that the dynamic behaviour of a metabolic process can be regulated by a cell-wide physical property: the dynamic state of intracellular water, which represents an emergent property.
format Online
Article
Text
id pubmed-5701229
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-57012292017-11-30 The dynamics of intracellular water constrains glycolytic oscillations in Saccharomyces cerevisiae Thoke, Henrik S. Thorsteinsson, Sigmundur Stock, Roberto P. Bagatolli, Luis A. Olsen, Lars F. Sci Rep Article We explored the dynamic coupling of intracellular water with metabolism in yeast cells. Using the polarity-sensitive probe 6-acetyl-2-dimethylaminonaphthalene (ACDAN), we show that glycolytic oscillations in the yeast S. cerevisiae BY4743 wild-type strain are coupled to the generalized polarization (GP) function of ACDAN, which measures the physical state of intracellular water. We analysed the oscillatory dynamics in wild type and 24 mutant strains with mutations in many different enzymes and proteins. Using fluorescence spectroscopy, we measured the amplitude and frequency of the metabolic oscillations and ACDAN GP in the resting state of all 25 strains. The results showed that there is a lower and an upper threshold of ACDAN GP, beyond which oscillations do not occur. This critical GP range is also phenomenologically linked to the occurrence of oscillations when cells are grown at different temperatures. Furthermore, the link between glycolytic oscillations and the ACDAN GP value also holds when ATP synthesis or the integrity of the cell cytoskeleton is perturbed. Our results represent the first demonstration that the dynamic behaviour of a metabolic process can be regulated by a cell-wide physical property: the dynamic state of intracellular water, which represents an emergent property. Nature Publishing Group UK 2017-11-24 /pmc/articles/PMC5701229/ /pubmed/29176686 http://dx.doi.org/10.1038/s41598-017-16442-x Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Thoke, Henrik S.
Thorsteinsson, Sigmundur
Stock, Roberto P.
Bagatolli, Luis A.
Olsen, Lars F.
The dynamics of intracellular water constrains glycolytic oscillations in Saccharomyces cerevisiae
title The dynamics of intracellular water constrains glycolytic oscillations in Saccharomyces cerevisiae
title_full The dynamics of intracellular water constrains glycolytic oscillations in Saccharomyces cerevisiae
title_fullStr The dynamics of intracellular water constrains glycolytic oscillations in Saccharomyces cerevisiae
title_full_unstemmed The dynamics of intracellular water constrains glycolytic oscillations in Saccharomyces cerevisiae
title_short The dynamics of intracellular water constrains glycolytic oscillations in Saccharomyces cerevisiae
title_sort dynamics of intracellular water constrains glycolytic oscillations in saccharomyces cerevisiae
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5701229/
https://www.ncbi.nlm.nih.gov/pubmed/29176686
http://dx.doi.org/10.1038/s41598-017-16442-x
work_keys_str_mv AT thokehenriks thedynamicsofintracellularwaterconstrainsglycolyticoscillationsinsaccharomycescerevisiae
AT thorsteinssonsigmundur thedynamicsofintracellularwaterconstrainsglycolyticoscillationsinsaccharomycescerevisiae
AT stockrobertop thedynamicsofintracellularwaterconstrainsglycolyticoscillationsinsaccharomycescerevisiae
AT bagatolliluisa thedynamicsofintracellularwaterconstrainsglycolyticoscillationsinsaccharomycescerevisiae
AT olsenlarsf thedynamicsofintracellularwaterconstrainsglycolyticoscillationsinsaccharomycescerevisiae
AT thokehenriks dynamicsofintracellularwaterconstrainsglycolyticoscillationsinsaccharomycescerevisiae
AT thorsteinssonsigmundur dynamicsofintracellularwaterconstrainsglycolyticoscillationsinsaccharomycescerevisiae
AT stockrobertop dynamicsofintracellularwaterconstrainsglycolyticoscillationsinsaccharomycescerevisiae
AT bagatolliluisa dynamicsofintracellularwaterconstrainsglycolyticoscillationsinsaccharomycescerevisiae
AT olsenlarsf dynamicsofintracellularwaterconstrainsglycolyticoscillationsinsaccharomycescerevisiae