Cargando…
I-ATAC: interactive pipeline for the management and pre-processing of ATAC-seq samples
Assay for Transposase Accessible Chromatin (ATAC-seq) is an open chromatin profiling assay that is adapted to interrogate chromatin accessibility from small cell numbers. ATAC-seq surmounted a major technical barrier and enabled epigenome profiling of clinical samples. With this advancement in techn...
Autores principales: | Ahmed, Zeeshan, Ucar, Duygu |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5702251/ https://www.ncbi.nlm.nih.gov/pubmed/29181276 http://dx.doi.org/10.7717/peerj.4040 |
Ejemplares similares
-
esATAC: an easy-to-use systematic pipeline for ATAC-seq data analysis
por: Wei, Zheng, et al.
Publicado: (2018) -
ATAC2GRN: optimized ATAC-seq and DNase1-seq pipelines for rapid and accurate genome regulatory network inference
por: Pranzatelli, Thomas J. F., et al.
Publicado: (2018) -
CoRE-ATAC: A deep learning model for the functional classification of regulatory elements from single cell and bulk ATAC-seq data
por: Thibodeau, Asa, et al.
Publicado: (2021) -
Correction to: ATAC2GRN: optimized ATAC-seq and DNase1-seq pipelines for rapid and accurate genome regulatory network inference
por: Pranzatelli, Thomas J. F., et al.
Publicado: (2019) -
Comprehensive analysis of single cell ATAC-seq data with SnapATAC
por: Fang, Rongxin, et al.
Publicado: (2021)