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Nematode grazing promotes bacterial community dynamics in soil at the aggregate level

Nematode predation has important roles in determining bacterial community composition and dynamics, but the extent of the effects remains largely rudimentary, particularly in natural environment settings. Here, we investigated the complex microbial–microfaunal interactions in the rhizosphere of maiz...

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Autores principales: Jiang, Yuji, Liu, Manqiang, Zhang, Jiabao, Chen, Yan, Chen, Xiaoyun, Chen, Lijun, Li, Huixin, Zhang, Xue-Xian, Sun, Bo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5702727/
https://www.ncbi.nlm.nih.gov/pubmed/28742069
http://dx.doi.org/10.1038/ismej.2017.120
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author Jiang, Yuji
Liu, Manqiang
Zhang, Jiabao
Chen, Yan
Chen, Xiaoyun
Chen, Lijun
Li, Huixin
Zhang, Xue-Xian
Sun, Bo
author_facet Jiang, Yuji
Liu, Manqiang
Zhang, Jiabao
Chen, Yan
Chen, Xiaoyun
Chen, Lijun
Li, Huixin
Zhang, Xue-Xian
Sun, Bo
author_sort Jiang, Yuji
collection PubMed
description Nematode predation has important roles in determining bacterial community composition and dynamics, but the extent of the effects remains largely rudimentary, particularly in natural environment settings. Here, we investigated the complex microbial–microfaunal interactions in the rhizosphere of maize grown in red soils, which were derived from four long-term fertilization regimes. Root-free rhizosphere soil samples were separated into three aggregate fractions whereby the abundance and community composition were examined for nematode and total bacterial communities. A functional group of alkaline phosphomonoesterase (ALP) producing bacteria was included to test the hypothesis that nematode grazing may significantly affect specific bacteria-mediated ecological functions, that is, organic phosphate cycling in soil. Results of correlation analysis, structural equation modeling and interaction networks combined with laboratory microcosm experiments consistently indicated that bacterivorous nematodes enhanced bacterial diversity, and the abundance of bacterivores was positively correlated with bacterial biomass, including ALP-producing bacterial abundance. Significantly, such effects were more pronounced in large macroaggregates than in microaggregates. There was a positive correlation between the most dominant bacterivores Protorhabditis and the ALP-producing keystone 'species' Mesorhizobium. Taken together, these findings implicate important roles of nematodes in stimulating bacterial dynamics in a spatially dependent manner.
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spelling pubmed-57027272017-12-01 Nematode grazing promotes bacterial community dynamics in soil at the aggregate level Jiang, Yuji Liu, Manqiang Zhang, Jiabao Chen, Yan Chen, Xiaoyun Chen, Lijun Li, Huixin Zhang, Xue-Xian Sun, Bo ISME J Original Article Nematode predation has important roles in determining bacterial community composition and dynamics, but the extent of the effects remains largely rudimentary, particularly in natural environment settings. Here, we investigated the complex microbial–microfaunal interactions in the rhizosphere of maize grown in red soils, which were derived from four long-term fertilization regimes. Root-free rhizosphere soil samples were separated into three aggregate fractions whereby the abundance and community composition were examined for nematode and total bacterial communities. A functional group of alkaline phosphomonoesterase (ALP) producing bacteria was included to test the hypothesis that nematode grazing may significantly affect specific bacteria-mediated ecological functions, that is, organic phosphate cycling in soil. Results of correlation analysis, structural equation modeling and interaction networks combined with laboratory microcosm experiments consistently indicated that bacterivorous nematodes enhanced bacterial diversity, and the abundance of bacterivores was positively correlated with bacterial biomass, including ALP-producing bacterial abundance. Significantly, such effects were more pronounced in large macroaggregates than in microaggregates. There was a positive correlation between the most dominant bacterivores Protorhabditis and the ALP-producing keystone 'species' Mesorhizobium. Taken together, these findings implicate important roles of nematodes in stimulating bacterial dynamics in a spatially dependent manner. Nature Publishing Group 2017-12 2017-07-25 /pmc/articles/PMC5702727/ /pubmed/28742069 http://dx.doi.org/10.1038/ismej.2017.120 Text en Copyright © 2017 The Author(s) http://creativecommons.org/licenses/by-nc-sa/4.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/4.0/
spellingShingle Original Article
Jiang, Yuji
Liu, Manqiang
Zhang, Jiabao
Chen, Yan
Chen, Xiaoyun
Chen, Lijun
Li, Huixin
Zhang, Xue-Xian
Sun, Bo
Nematode grazing promotes bacterial community dynamics in soil at the aggregate level
title Nematode grazing promotes bacterial community dynamics in soil at the aggregate level
title_full Nematode grazing promotes bacterial community dynamics in soil at the aggregate level
title_fullStr Nematode grazing promotes bacterial community dynamics in soil at the aggregate level
title_full_unstemmed Nematode grazing promotes bacterial community dynamics in soil at the aggregate level
title_short Nematode grazing promotes bacterial community dynamics in soil at the aggregate level
title_sort nematode grazing promotes bacterial community dynamics in soil at the aggregate level
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5702727/
https://www.ncbi.nlm.nih.gov/pubmed/28742069
http://dx.doi.org/10.1038/ismej.2017.120
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