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Automated visualization of rule-based models

Frameworks such as BioNetGen, Kappa and Simmune use “reaction rules” to specify biochemical interactions compactly, where each rule specifies a mechanism such as binding or phosphorylation and its structural requirements. Current rule-based models of signaling pathways have tens to hundreds of rules...

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Detalles Bibliográficos
Autores principales: Sekar, John Arul Prakash, Tapia, Jose-Juan, Faeder, James R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5703574/
https://www.ncbi.nlm.nih.gov/pubmed/29131816
http://dx.doi.org/10.1371/journal.pcbi.1005857

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