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Duchenne Muscular Dystrophy (DMD) Protein-Protein Interaction Mapping

OBJECTIVE: Duchenne muscular dystrophy (DMD) is one of the mortal diseases, subjected to study in terms of molecular investigation. In this study, the protein interaction map of this muscle-wasting condition was generated to gain a better knowledge of interactome profile of DMD. MATERIALS & METH...

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Autores principales: REZAEI TAVIRANI, Mostafa, OkHOVATIAN, Farshad, ZAMANIAN AZODI, Mona, REZAEI TAVIRANI, Majid
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Shahid Beheshti University of Medical Sciences 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5703623/
https://www.ncbi.nlm.nih.gov/pubmed/29201118
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author REZAEI TAVIRANI, Mostafa
OkHOVATIAN, Farshad
ZAMANIAN AZODI, Mona
REZAEI TAVIRANI, Majid
author_facet REZAEI TAVIRANI, Mostafa
OkHOVATIAN, Farshad
ZAMANIAN AZODI, Mona
REZAEI TAVIRANI, Majid
author_sort REZAEI TAVIRANI, Mostafa
collection PubMed
description OBJECTIVE: Duchenne muscular dystrophy (DMD) is one of the mortal diseases, subjected to study in terms of molecular investigation. In this study, the protein interaction map of this muscle-wasting condition was generated to gain a better knowledge of interactome profile of DMD. MATERIALS & METHODS: Applying Cytoscape and String Database, the protein-protein interaction network was constructed and the gene ontology of the constructed network was analyzed for biological process, molecular function, and cellular component annotations. RESULTS: Among 100 proteins related to DMD, dystrophin, utrophin, caveolin 3, and myogenic differentiation 1 play key roles in DMD network. In addition, the gene ontology analysis showed that regulation processes, kinase activity, and sarcoplasmic reticulum were the highlighted biological processes, molecular function, and cell component enrichments respectively for the proteins related to DMD. CONCLUSION: The central proteins and the enriched ontologies can be suggested as possible prominent agents in DMD; however, the validation studies may be required.
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spelling pubmed-57036232018-01-01 Duchenne Muscular Dystrophy (DMD) Protein-Protein Interaction Mapping REZAEI TAVIRANI, Mostafa OkHOVATIAN, Farshad ZAMANIAN AZODI, Mona REZAEI TAVIRANI, Majid Iran J Child Neurol Original Article OBJECTIVE: Duchenne muscular dystrophy (DMD) is one of the mortal diseases, subjected to study in terms of molecular investigation. In this study, the protein interaction map of this muscle-wasting condition was generated to gain a better knowledge of interactome profile of DMD. MATERIALS & METHODS: Applying Cytoscape and String Database, the protein-protein interaction network was constructed and the gene ontology of the constructed network was analyzed for biological process, molecular function, and cellular component annotations. RESULTS: Among 100 proteins related to DMD, dystrophin, utrophin, caveolin 3, and myogenic differentiation 1 play key roles in DMD network. In addition, the gene ontology analysis showed that regulation processes, kinase activity, and sarcoplasmic reticulum were the highlighted biological processes, molecular function, and cell component enrichments respectively for the proteins related to DMD. CONCLUSION: The central proteins and the enriched ontologies can be suggested as possible prominent agents in DMD; however, the validation studies may be required. Shahid Beheshti University of Medical Sciences 2017 /pmc/articles/PMC5703623/ /pubmed/29201118 Text en This is an Open Access article distributed under the terms of the Creative Commons Attribution License, (http://creativecommons.org/licenses/by/3.0/) which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
REZAEI TAVIRANI, Mostafa
OkHOVATIAN, Farshad
ZAMANIAN AZODI, Mona
REZAEI TAVIRANI, Majid
Duchenne Muscular Dystrophy (DMD) Protein-Protein Interaction Mapping
title Duchenne Muscular Dystrophy (DMD) Protein-Protein Interaction Mapping
title_full Duchenne Muscular Dystrophy (DMD) Protein-Protein Interaction Mapping
title_fullStr Duchenne Muscular Dystrophy (DMD) Protein-Protein Interaction Mapping
title_full_unstemmed Duchenne Muscular Dystrophy (DMD) Protein-Protein Interaction Mapping
title_short Duchenne Muscular Dystrophy (DMD) Protein-Protein Interaction Mapping
title_sort duchenne muscular dystrophy (dmd) protein-protein interaction mapping
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5703623/
https://www.ncbi.nlm.nih.gov/pubmed/29201118
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