Cargando…
Duchenne Muscular Dystrophy (DMD) Protein-Protein Interaction Mapping
OBJECTIVE: Duchenne muscular dystrophy (DMD) is one of the mortal diseases, subjected to study in terms of molecular investigation. In this study, the protein interaction map of this muscle-wasting condition was generated to gain a better knowledge of interactome profile of DMD. MATERIALS & METH...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Shahid Beheshti University of Medical Sciences
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5703623/ https://www.ncbi.nlm.nih.gov/pubmed/29201118 |
_version_ | 1783281718887710720 |
---|---|
author | REZAEI TAVIRANI, Mostafa OkHOVATIAN, Farshad ZAMANIAN AZODI, Mona REZAEI TAVIRANI, Majid |
author_facet | REZAEI TAVIRANI, Mostafa OkHOVATIAN, Farshad ZAMANIAN AZODI, Mona REZAEI TAVIRANI, Majid |
author_sort | REZAEI TAVIRANI, Mostafa |
collection | PubMed |
description | OBJECTIVE: Duchenne muscular dystrophy (DMD) is one of the mortal diseases, subjected to study in terms of molecular investigation. In this study, the protein interaction map of this muscle-wasting condition was generated to gain a better knowledge of interactome profile of DMD. MATERIALS & METHODS: Applying Cytoscape and String Database, the protein-protein interaction network was constructed and the gene ontology of the constructed network was analyzed for biological process, molecular function, and cellular component annotations. RESULTS: Among 100 proteins related to DMD, dystrophin, utrophin, caveolin 3, and myogenic differentiation 1 play key roles in DMD network. In addition, the gene ontology analysis showed that regulation processes, kinase activity, and sarcoplasmic reticulum were the highlighted biological processes, molecular function, and cell component enrichments respectively for the proteins related to DMD. CONCLUSION: The central proteins and the enriched ontologies can be suggested as possible prominent agents in DMD; however, the validation studies may be required. |
format | Online Article Text |
id | pubmed-5703623 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Shahid Beheshti University of Medical Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-57036232018-01-01 Duchenne Muscular Dystrophy (DMD) Protein-Protein Interaction Mapping REZAEI TAVIRANI, Mostafa OkHOVATIAN, Farshad ZAMANIAN AZODI, Mona REZAEI TAVIRANI, Majid Iran J Child Neurol Original Article OBJECTIVE: Duchenne muscular dystrophy (DMD) is one of the mortal diseases, subjected to study in terms of molecular investigation. In this study, the protein interaction map of this muscle-wasting condition was generated to gain a better knowledge of interactome profile of DMD. MATERIALS & METHODS: Applying Cytoscape and String Database, the protein-protein interaction network was constructed and the gene ontology of the constructed network was analyzed for biological process, molecular function, and cellular component annotations. RESULTS: Among 100 proteins related to DMD, dystrophin, utrophin, caveolin 3, and myogenic differentiation 1 play key roles in DMD network. In addition, the gene ontology analysis showed that regulation processes, kinase activity, and sarcoplasmic reticulum were the highlighted biological processes, molecular function, and cell component enrichments respectively for the proteins related to DMD. CONCLUSION: The central proteins and the enriched ontologies can be suggested as possible prominent agents in DMD; however, the validation studies may be required. Shahid Beheshti University of Medical Sciences 2017 /pmc/articles/PMC5703623/ /pubmed/29201118 Text en This is an Open Access article distributed under the terms of the Creative Commons Attribution License, (http://creativecommons.org/licenses/by/3.0/) which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article REZAEI TAVIRANI, Mostafa OkHOVATIAN, Farshad ZAMANIAN AZODI, Mona REZAEI TAVIRANI, Majid Duchenne Muscular Dystrophy (DMD) Protein-Protein Interaction Mapping |
title | Duchenne Muscular Dystrophy (DMD) Protein-Protein Interaction Mapping |
title_full | Duchenne Muscular Dystrophy (DMD) Protein-Protein Interaction Mapping |
title_fullStr | Duchenne Muscular Dystrophy (DMD) Protein-Protein Interaction Mapping |
title_full_unstemmed | Duchenne Muscular Dystrophy (DMD) Protein-Protein Interaction Mapping |
title_short | Duchenne Muscular Dystrophy (DMD) Protein-Protein Interaction Mapping |
title_sort | duchenne muscular dystrophy (dmd) protein-protein interaction mapping |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5703623/ https://www.ncbi.nlm.nih.gov/pubmed/29201118 |
work_keys_str_mv | AT rezaeitaviranimostafa duchennemusculardystrophydmdproteinproteininteractionmapping AT okhovatianfarshad duchennemusculardystrophydmdproteinproteininteractionmapping AT zamanianazodimona duchennemusculardystrophydmdproteinproteininteractionmapping AT rezaeitaviranimajid duchennemusculardystrophydmdproteinproteininteractionmapping |