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The Small and the Dead: A Review of Ancient DNA Studies Analysing Micromammal Species

The field of ancient DNA (aDNA) has recently been in a state of exponential growth, largely driven by the uptake of Next Generation Sequencing (NGS) techniques. Much of this work has focused on the mammalian megafauna and ancient humans, with comparatively less studies looking at micromammal fauna,...

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Detalles Bibliográficos
Autores principales: Woods, Roseina, Marr, Melissa M., Brace, Selina, Barnes, Ian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5704225/
https://www.ncbi.nlm.nih.gov/pubmed/29117125
http://dx.doi.org/10.3390/genes8110312
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author Woods, Roseina
Marr, Melissa M.
Brace, Selina
Barnes, Ian
author_facet Woods, Roseina
Marr, Melissa M.
Brace, Selina
Barnes, Ian
author_sort Woods, Roseina
collection PubMed
description The field of ancient DNA (aDNA) has recently been in a state of exponential growth, largely driven by the uptake of Next Generation Sequencing (NGS) techniques. Much of this work has focused on the mammalian megafauna and ancient humans, with comparatively less studies looking at micromammal fauna, despite the potential of these species in testing evolutionary, environmental and taxonomic theories. Several factors make micromammal fauna ideally suited for aDNA extraction and sequencing. Micromammal subfossil assemblages often include the large number of individuals appropriate for population level analyses, and, furthermore, the assemblages are frequently found in cave sites where the constant temperature and sheltered environment provide favourable conditions for DNA preservation. This review looks at studies that include the use of aDNA in molecular analysis of micromammal fauna, in order to examine the wide array of questions that can be answered in the study of small mammals using new palaeogenetic techniques. This study highlights the bias in current aDNA studies and assesses the future use of aDNA as a tool for the study of micromammal fauna.
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spelling pubmed-57042252017-11-30 The Small and the Dead: A Review of Ancient DNA Studies Analysing Micromammal Species Woods, Roseina Marr, Melissa M. Brace, Selina Barnes, Ian Genes (Basel) Review The field of ancient DNA (aDNA) has recently been in a state of exponential growth, largely driven by the uptake of Next Generation Sequencing (NGS) techniques. Much of this work has focused on the mammalian megafauna and ancient humans, with comparatively less studies looking at micromammal fauna, despite the potential of these species in testing evolutionary, environmental and taxonomic theories. Several factors make micromammal fauna ideally suited for aDNA extraction and sequencing. Micromammal subfossil assemblages often include the large number of individuals appropriate for population level analyses, and, furthermore, the assemblages are frequently found in cave sites where the constant temperature and sheltered environment provide favourable conditions for DNA preservation. This review looks at studies that include the use of aDNA in molecular analysis of micromammal fauna, in order to examine the wide array of questions that can be answered in the study of small mammals using new palaeogenetic techniques. This study highlights the bias in current aDNA studies and assesses the future use of aDNA as a tool for the study of micromammal fauna. MDPI 2017-11-08 /pmc/articles/PMC5704225/ /pubmed/29117125 http://dx.doi.org/10.3390/genes8110312 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Woods, Roseina
Marr, Melissa M.
Brace, Selina
Barnes, Ian
The Small and the Dead: A Review of Ancient DNA Studies Analysing Micromammal Species
title The Small and the Dead: A Review of Ancient DNA Studies Analysing Micromammal Species
title_full The Small and the Dead: A Review of Ancient DNA Studies Analysing Micromammal Species
title_fullStr The Small and the Dead: A Review of Ancient DNA Studies Analysing Micromammal Species
title_full_unstemmed The Small and the Dead: A Review of Ancient DNA Studies Analysing Micromammal Species
title_short The Small and the Dead: A Review of Ancient DNA Studies Analysing Micromammal Species
title_sort small and the dead: a review of ancient dna studies analysing micromammal species
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5704225/
https://www.ncbi.nlm.nih.gov/pubmed/29117125
http://dx.doi.org/10.3390/genes8110312
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