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Comprehensive genomic sequencing detects important genetic differences between right-sided and left-sided colorectal cancer

OBJECTIVES: Anti-epidermal growth factor receptor (EGFR) therapy has been found to be more effective against left-sided colorectal cancer (LCRC) than right-sided colorectal cancer (RCRC). We hypothesized that RCRC is more likely to harbor genetic alterations associated with resistance to anti-EGFR t...

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Autores principales: Shimada, Yoshifumi, Kameyama, Hitoshi, Nagahashi, Masayuki, Ichikawa, Hiroshi, Muneoka, Yusuke, Yagi, Ryoma, Tajima, Yosuke, Okamura, Takuma, Nakano, Masato, Sakata, Jun, Kobayashi, Takashi, Nogami, Hitoshi, Maruyama, Satoshi, Takii, Yasumasa, Hayashida, Tetsu, Takaishi, Hiromasa, Kitagawa, Yuko, Oki, Eiji, Konishi, Tsuyoshi, Ishida, Fumio, Kudo, Shin-ei, Ring, Jennifer E., Protopopov, Alexei, Lyle, Stephen, Ling, Yiwei, Okuda, Shujiro, Ishikawa, Takashi, Akazawa, Kohei, Takabe, Kazuaki, Wakai, Toshifumi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals LLC 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5706819/
https://www.ncbi.nlm.nih.gov/pubmed/29212173
http://dx.doi.org/10.18632/oncotarget.20510
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author Shimada, Yoshifumi
Kameyama, Hitoshi
Nagahashi, Masayuki
Ichikawa, Hiroshi
Muneoka, Yusuke
Yagi, Ryoma
Tajima, Yosuke
Okamura, Takuma
Nakano, Masato
Sakata, Jun
Kobayashi, Takashi
Nogami, Hitoshi
Maruyama, Satoshi
Takii, Yasumasa
Hayashida, Tetsu
Takaishi, Hiromasa
Kitagawa, Yuko
Oki, Eiji
Konishi, Tsuyoshi
Ishida, Fumio
Kudo, Shin-ei
Ring, Jennifer E.
Protopopov, Alexei
Lyle, Stephen
Ling, Yiwei
Okuda, Shujiro
Ishikawa, Takashi
Akazawa, Kohei
Takabe, Kazuaki
Wakai, Toshifumi
author_facet Shimada, Yoshifumi
Kameyama, Hitoshi
Nagahashi, Masayuki
Ichikawa, Hiroshi
Muneoka, Yusuke
Yagi, Ryoma
Tajima, Yosuke
Okamura, Takuma
Nakano, Masato
Sakata, Jun
Kobayashi, Takashi
Nogami, Hitoshi
Maruyama, Satoshi
Takii, Yasumasa
Hayashida, Tetsu
Takaishi, Hiromasa
Kitagawa, Yuko
Oki, Eiji
Konishi, Tsuyoshi
Ishida, Fumio
Kudo, Shin-ei
Ring, Jennifer E.
Protopopov, Alexei
Lyle, Stephen
Ling, Yiwei
Okuda, Shujiro
Ishikawa, Takashi
Akazawa, Kohei
Takabe, Kazuaki
Wakai, Toshifumi
author_sort Shimada, Yoshifumi
collection PubMed
description OBJECTIVES: Anti-epidermal growth factor receptor (EGFR) therapy has been found to be more effective against left-sided colorectal cancer (LCRC) than right-sided colorectal cancer (RCRC). We hypothesized that RCRC is more likely to harbor genetic alterations associated with resistance to anti-EGFR therapy and tested this using comprehensive genomic sequencing. MATERIALS AND METHODS: A total of 201 patients with either primary RCRC or LCRC were analyzed. We investigated tumors for genetic alterations using a 415-gene panel, which included alterations associated with resistance to anti-EGFR therapy: TK receptors (ERBB2, MET, EGFR, FGFR1, and PDGFRA), RAS pathway (KRAS, NRAS, HRAS, BRAF, and MAPK2K1), and PI3K pathway (PTEN and PIK3CA). Patients whose tumors had no alterations in these 12 genes, theoretically considered to respond to anti-EGFR therapy, were defined as “all wild-type”, while remaining patients were defined as “mutant-type”. RESULTS: Fifty-six patients (28%) and 145 patients (72%) had RCRC and LCRC, respectively. Regarding genetic alterations associated with anti-EGFR therapy, only 6 of 56 patients (11%) with RCRC were “all wild-type” compared with 41 of 145 patients (28%) with LCRC (P = 0.009). Among the 49 patients who received anti-EGFR therapy, RCRC showed significantly worse progression-free survival (PFS) than LCRC (P = 0.022), and “mutant-type” RCRC showed significantly worse PFS compared with “all wild-type” LCRC (P = 0.004). CONCLUSIONS: RCRC is more likely to harbor genetic alterations associated with resistance to anti-EGFR therapy compared with LCRC. Furthermore, our data shows primary tumor sidedness is a surrogate for the non-random distribution of genetic alterations in CRC.
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spelling pubmed-57068192017-12-05 Comprehensive genomic sequencing detects important genetic differences between right-sided and left-sided colorectal cancer Shimada, Yoshifumi Kameyama, Hitoshi Nagahashi, Masayuki Ichikawa, Hiroshi Muneoka, Yusuke Yagi, Ryoma Tajima, Yosuke Okamura, Takuma Nakano, Masato Sakata, Jun Kobayashi, Takashi Nogami, Hitoshi Maruyama, Satoshi Takii, Yasumasa Hayashida, Tetsu Takaishi, Hiromasa Kitagawa, Yuko Oki, Eiji Konishi, Tsuyoshi Ishida, Fumio Kudo, Shin-ei Ring, Jennifer E. Protopopov, Alexei Lyle, Stephen Ling, Yiwei Okuda, Shujiro Ishikawa, Takashi Akazawa, Kohei Takabe, Kazuaki Wakai, Toshifumi Oncotarget Research Paper OBJECTIVES: Anti-epidermal growth factor receptor (EGFR) therapy has been found to be more effective against left-sided colorectal cancer (LCRC) than right-sided colorectal cancer (RCRC). We hypothesized that RCRC is more likely to harbor genetic alterations associated with resistance to anti-EGFR therapy and tested this using comprehensive genomic sequencing. MATERIALS AND METHODS: A total of 201 patients with either primary RCRC or LCRC were analyzed. We investigated tumors for genetic alterations using a 415-gene panel, which included alterations associated with resistance to anti-EGFR therapy: TK receptors (ERBB2, MET, EGFR, FGFR1, and PDGFRA), RAS pathway (KRAS, NRAS, HRAS, BRAF, and MAPK2K1), and PI3K pathway (PTEN and PIK3CA). Patients whose tumors had no alterations in these 12 genes, theoretically considered to respond to anti-EGFR therapy, were defined as “all wild-type”, while remaining patients were defined as “mutant-type”. RESULTS: Fifty-six patients (28%) and 145 patients (72%) had RCRC and LCRC, respectively. Regarding genetic alterations associated with anti-EGFR therapy, only 6 of 56 patients (11%) with RCRC were “all wild-type” compared with 41 of 145 patients (28%) with LCRC (P = 0.009). Among the 49 patients who received anti-EGFR therapy, RCRC showed significantly worse progression-free survival (PFS) than LCRC (P = 0.022), and “mutant-type” RCRC showed significantly worse PFS compared with “all wild-type” LCRC (P = 0.004). CONCLUSIONS: RCRC is more likely to harbor genetic alterations associated with resistance to anti-EGFR therapy compared with LCRC. Furthermore, our data shows primary tumor sidedness is a surrogate for the non-random distribution of genetic alterations in CRC. Impact Journals LLC 2017-08-24 /pmc/articles/PMC5706819/ /pubmed/29212173 http://dx.doi.org/10.18632/oncotarget.20510 Text en Copyright: © 2017 Shimada et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) 3.0 (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Shimada, Yoshifumi
Kameyama, Hitoshi
Nagahashi, Masayuki
Ichikawa, Hiroshi
Muneoka, Yusuke
Yagi, Ryoma
Tajima, Yosuke
Okamura, Takuma
Nakano, Masato
Sakata, Jun
Kobayashi, Takashi
Nogami, Hitoshi
Maruyama, Satoshi
Takii, Yasumasa
Hayashida, Tetsu
Takaishi, Hiromasa
Kitagawa, Yuko
Oki, Eiji
Konishi, Tsuyoshi
Ishida, Fumio
Kudo, Shin-ei
Ring, Jennifer E.
Protopopov, Alexei
Lyle, Stephen
Ling, Yiwei
Okuda, Shujiro
Ishikawa, Takashi
Akazawa, Kohei
Takabe, Kazuaki
Wakai, Toshifumi
Comprehensive genomic sequencing detects important genetic differences between right-sided and left-sided colorectal cancer
title Comprehensive genomic sequencing detects important genetic differences between right-sided and left-sided colorectal cancer
title_full Comprehensive genomic sequencing detects important genetic differences between right-sided and left-sided colorectal cancer
title_fullStr Comprehensive genomic sequencing detects important genetic differences between right-sided and left-sided colorectal cancer
title_full_unstemmed Comprehensive genomic sequencing detects important genetic differences between right-sided and left-sided colorectal cancer
title_short Comprehensive genomic sequencing detects important genetic differences between right-sided and left-sided colorectal cancer
title_sort comprehensive genomic sequencing detects important genetic differences between right-sided and left-sided colorectal cancer
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5706819/
https://www.ncbi.nlm.nih.gov/pubmed/29212173
http://dx.doi.org/10.18632/oncotarget.20510
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