Cargando…

Engineering substrate promiscuity in halophilic alcohol dehydrogenase (HvADH2) by in silico design

An alcohol dehydrogenase from the halophilic archaeon Haloferax volcanii (HvADH2) has been engineered by rational design to broaden its substrate scope towards the conversion of a range of aromatic substrates, including flurbiprofenol, that is an intermediate of the non-steroidal anti-inflammatory d...

Descripción completa

Detalles Bibliográficos
Autores principales: Cassidy, Jennifer, Bruen, Larah, Rosini, Elena, Molla, Gianluca, Pollegioni, Loredano, Paradisi, Francesca
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5708825/
https://www.ncbi.nlm.nih.gov/pubmed/29190711
http://dx.doi.org/10.1371/journal.pone.0187482
_version_ 1783282693209849856
author Cassidy, Jennifer
Bruen, Larah
Rosini, Elena
Molla, Gianluca
Pollegioni, Loredano
Paradisi, Francesca
author_facet Cassidy, Jennifer
Bruen, Larah
Rosini, Elena
Molla, Gianluca
Pollegioni, Loredano
Paradisi, Francesca
author_sort Cassidy, Jennifer
collection PubMed
description An alcohol dehydrogenase from the halophilic archaeon Haloferax volcanii (HvADH2) has been engineered by rational design to broaden its substrate scope towards the conversion of a range of aromatic substrates, including flurbiprofenol, that is an intermediate of the non-steroidal anti-inflammatory drug, flurbiprofen. Wild-type HvADH2 showed minimal activity with flurbiprofenol (11.1 mU/mg). A homology model of HvADH2 was built and docking experiments with this substrate revealed that the biphenyl rings of flurbiprofenol formed strong interactions with residues F85 and F108, preventing its optimal binding in the active site. Mutations at position 85 however did not increase activity. Site directed mutagenesis at position F108 allowed the identification of three variants showing a significant (up to 2.3-fold) enhancement of activity towards flurbiprofenol, when compared to wild-type HvADH2. Interestingly, F108G variant did not show the classic inhibition in the presence of (R)-enantiomer when tested with rac-1-phenylethanol, underling its potential in racemic resolution of secondary alcohols.
format Online
Article
Text
id pubmed-5708825
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-57088252017-12-15 Engineering substrate promiscuity in halophilic alcohol dehydrogenase (HvADH2) by in silico design Cassidy, Jennifer Bruen, Larah Rosini, Elena Molla, Gianluca Pollegioni, Loredano Paradisi, Francesca PLoS One Research Article An alcohol dehydrogenase from the halophilic archaeon Haloferax volcanii (HvADH2) has been engineered by rational design to broaden its substrate scope towards the conversion of a range of aromatic substrates, including flurbiprofenol, that is an intermediate of the non-steroidal anti-inflammatory drug, flurbiprofen. Wild-type HvADH2 showed minimal activity with flurbiprofenol (11.1 mU/mg). A homology model of HvADH2 was built and docking experiments with this substrate revealed that the biphenyl rings of flurbiprofenol formed strong interactions with residues F85 and F108, preventing its optimal binding in the active site. Mutations at position 85 however did not increase activity. Site directed mutagenesis at position F108 allowed the identification of three variants showing a significant (up to 2.3-fold) enhancement of activity towards flurbiprofenol, when compared to wild-type HvADH2. Interestingly, F108G variant did not show the classic inhibition in the presence of (R)-enantiomer when tested with rac-1-phenylethanol, underling its potential in racemic resolution of secondary alcohols. Public Library of Science 2017-11-30 /pmc/articles/PMC5708825/ /pubmed/29190711 http://dx.doi.org/10.1371/journal.pone.0187482 Text en © 2017 Cassidy et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Cassidy, Jennifer
Bruen, Larah
Rosini, Elena
Molla, Gianluca
Pollegioni, Loredano
Paradisi, Francesca
Engineering substrate promiscuity in halophilic alcohol dehydrogenase (HvADH2) by in silico design
title Engineering substrate promiscuity in halophilic alcohol dehydrogenase (HvADH2) by in silico design
title_full Engineering substrate promiscuity in halophilic alcohol dehydrogenase (HvADH2) by in silico design
title_fullStr Engineering substrate promiscuity in halophilic alcohol dehydrogenase (HvADH2) by in silico design
title_full_unstemmed Engineering substrate promiscuity in halophilic alcohol dehydrogenase (HvADH2) by in silico design
title_short Engineering substrate promiscuity in halophilic alcohol dehydrogenase (HvADH2) by in silico design
title_sort engineering substrate promiscuity in halophilic alcohol dehydrogenase (hvadh2) by in silico design
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5708825/
https://www.ncbi.nlm.nih.gov/pubmed/29190711
http://dx.doi.org/10.1371/journal.pone.0187482
work_keys_str_mv AT cassidyjennifer engineeringsubstratepromiscuityinhalophilicalcoholdehydrogenasehvadh2byinsilicodesign
AT bruenlarah engineeringsubstratepromiscuityinhalophilicalcoholdehydrogenasehvadh2byinsilicodesign
AT rosinielena engineeringsubstratepromiscuityinhalophilicalcoholdehydrogenasehvadh2byinsilicodesign
AT mollagianluca engineeringsubstratepromiscuityinhalophilicalcoholdehydrogenasehvadh2byinsilicodesign
AT pollegioniloredano engineeringsubstratepromiscuityinhalophilicalcoholdehydrogenasehvadh2byinsilicodesign
AT paradisifrancesca engineeringsubstratepromiscuityinhalophilicalcoholdehydrogenasehvadh2byinsilicodesign