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Genetic parameters and expected responses to selection for components of feed efficiency in a Duroc pig line

BACKGROUND: Improving feed efficiency ([Formula: see text] ) is a key factor for any pig breeding company. Although this can be achieved by selection on an index of multi-trait best linear unbiased prediction of breeding values with optimal economic weights, considering deviations of feed intake fro...

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Autores principales: Sánchez, Juan P., Ragab, Mohamed, Quintanilla, Raquel, Rothschild, Max F., Piles, Miriam
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5710070/
https://www.ncbi.nlm.nih.gov/pubmed/29191169
http://dx.doi.org/10.1186/s12711-017-0362-x
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author Sánchez, Juan P.
Ragab, Mohamed
Quintanilla, Raquel
Rothschild, Max F.
Piles, Miriam
author_facet Sánchez, Juan P.
Ragab, Mohamed
Quintanilla, Raquel
Rothschild, Max F.
Piles, Miriam
author_sort Sánchez, Juan P.
collection PubMed
description BACKGROUND: Improving feed efficiency ([Formula: see text] ) is a key factor for any pig breeding company. Although this can be achieved by selection on an index of multi-trait best linear unbiased prediction of breeding values with optimal economic weights, considering deviations of feed intake from actual needs ([Formula: see text] ) should be of value for further research on biological aspects of [Formula: see text] . Here, we present a random regression model that extends the classical definition of [Formula: see text] by including animal-specific needs in the model. Using this model, we explore the genetic determinism of several [Formula: see text] components: use of feed for growth ([Formula: see text] ), use of feed for backfat deposition ([Formula: see text] ), use of feed for maintenance ([Formula: see text] ), and unspecific efficiency in the use of feed ([Formula: see text] ). Expected response to alternative selection indexes involving different components is also studied. RESULTS: Based on goodness-of-fit to the available feed intake ([Formula: see text] ) data, the model that assumes individual (genetic and permanent) variation in the use of feed for maintenance, [Formula: see text] and [Formula: see text] showed the best performance. Joint individual variation in feed allocation to maintenance, growth and backfat deposition comprised 37% of the individual variation of [Formula: see text] . The estimated heritabilities of [Formula: see text] using the model that accounts for animal-specific needs and the traditional [Formula: see text] model were 0.12 and 0.18, respectively. The estimated heritabilities for the regression coefficients were 0.44, 0.39 and 0.55 for [Formula: see text] , [Formula: see text] and [Formula: see text] , respectively. Estimates of genetic correlations of [Formula: see text] were positive with amount of feed used for [Formula: see text] and [Formula: see text] but negative for [Formula: see text] . Expected response in overall efficiency, reducing [Formula: see text] without altering performance, was 2.5% higher when the model assumed animal-specific needs than when the traditional definition of [Formula: see text] was considered. CONCLUSIONS: Expected response in overall efficiency, by reducing [Formula: see text] without altering performance, is slightly better with a model that assumes animal-specific needs instead of batch-specific needs to correct [Formula: see text] . The relatively small difference between the traditional [Formula: see text] model and our model is due to random intercepts (unspecific use of feed) accounting for the majority of variability in [Formula: see text] . Overall, a model that accounts for animal-specific needs for [Formula: see text] , [Formula: see text] and [Formula: see text] is statistically superior and allows for the possibility to act differentially on [Formula: see text] components.
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spelling pubmed-57100702017-12-06 Genetic parameters and expected responses to selection for components of feed efficiency in a Duroc pig line Sánchez, Juan P. Ragab, Mohamed Quintanilla, Raquel Rothschild, Max F. Piles, Miriam Genet Sel Evol Research Article BACKGROUND: Improving feed efficiency ([Formula: see text] ) is a key factor for any pig breeding company. Although this can be achieved by selection on an index of multi-trait best linear unbiased prediction of breeding values with optimal economic weights, considering deviations of feed intake from actual needs ([Formula: see text] ) should be of value for further research on biological aspects of [Formula: see text] . Here, we present a random regression model that extends the classical definition of [Formula: see text] by including animal-specific needs in the model. Using this model, we explore the genetic determinism of several [Formula: see text] components: use of feed for growth ([Formula: see text] ), use of feed for backfat deposition ([Formula: see text] ), use of feed for maintenance ([Formula: see text] ), and unspecific efficiency in the use of feed ([Formula: see text] ). Expected response to alternative selection indexes involving different components is also studied. RESULTS: Based on goodness-of-fit to the available feed intake ([Formula: see text] ) data, the model that assumes individual (genetic and permanent) variation in the use of feed for maintenance, [Formula: see text] and [Formula: see text] showed the best performance. Joint individual variation in feed allocation to maintenance, growth and backfat deposition comprised 37% of the individual variation of [Formula: see text] . The estimated heritabilities of [Formula: see text] using the model that accounts for animal-specific needs and the traditional [Formula: see text] model were 0.12 and 0.18, respectively. The estimated heritabilities for the regression coefficients were 0.44, 0.39 and 0.55 for [Formula: see text] , [Formula: see text] and [Formula: see text] , respectively. Estimates of genetic correlations of [Formula: see text] were positive with amount of feed used for [Formula: see text] and [Formula: see text] but negative for [Formula: see text] . Expected response in overall efficiency, reducing [Formula: see text] without altering performance, was 2.5% higher when the model assumed animal-specific needs than when the traditional definition of [Formula: see text] was considered. CONCLUSIONS: Expected response in overall efficiency, by reducing [Formula: see text] without altering performance, is slightly better with a model that assumes animal-specific needs instead of batch-specific needs to correct [Formula: see text] . The relatively small difference between the traditional [Formula: see text] model and our model is due to random intercepts (unspecific use of feed) accounting for the majority of variability in [Formula: see text] . Overall, a model that accounts for animal-specific needs for [Formula: see text] , [Formula: see text] and [Formula: see text] is statistically superior and allows for the possibility to act differentially on [Formula: see text] components. BioMed Central 2017-12-01 /pmc/articles/PMC5710070/ /pubmed/29191169 http://dx.doi.org/10.1186/s12711-017-0362-x Text en © The Author(s) 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Sánchez, Juan P.
Ragab, Mohamed
Quintanilla, Raquel
Rothschild, Max F.
Piles, Miriam
Genetic parameters and expected responses to selection for components of feed efficiency in a Duroc pig line
title Genetic parameters and expected responses to selection for components of feed efficiency in a Duroc pig line
title_full Genetic parameters and expected responses to selection for components of feed efficiency in a Duroc pig line
title_fullStr Genetic parameters and expected responses to selection for components of feed efficiency in a Duroc pig line
title_full_unstemmed Genetic parameters and expected responses to selection for components of feed efficiency in a Duroc pig line
title_short Genetic parameters and expected responses to selection for components of feed efficiency in a Duroc pig line
title_sort genetic parameters and expected responses to selection for components of feed efficiency in a duroc pig line
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5710070/
https://www.ncbi.nlm.nih.gov/pubmed/29191169
http://dx.doi.org/10.1186/s12711-017-0362-x
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