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The presence of genes encoding enzymes that digest carbohydrates in coral genomes and analysis of their activities
Numerous enzymes that digest carbohydrates, such as cellulases and chitinases, are present in various organisms (e.g., termites, nematodes, and so on). Recently, the presence of cellulases and chitinases has been reported in marine organisms such as urchin and bivalves, and their several roles in ma...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5710165/ https://www.ncbi.nlm.nih.gov/pubmed/29201566 http://dx.doi.org/10.7717/peerj.4087 |
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author | Yoshioka, Yuki Tanabe, Toshiaki Iguchi, Akira |
author_facet | Yoshioka, Yuki Tanabe, Toshiaki Iguchi, Akira |
author_sort | Yoshioka, Yuki |
collection | PubMed |
description | Numerous enzymes that digest carbohydrates, such as cellulases and chitinases, are present in various organisms (e.g., termites, nematodes, and so on). Recently, the presence of cellulases and chitinases has been reported in marine organisms such as urchin and bivalves, and their several roles in marine ecosystems have been proposed. In this study, we reported the presence of genes predicted to encode proteins similar to cellulases and chitinases in the genome of the coral Acropora digitifera, their gene expression patterns at various life stages, and cellulose- and chitin-degrading enzyme activities in several coral species (A. digitifera, Galaxea fascicularis, Goniastrea aspera, Montipora digitata, Pavona divaricata, Pocillopora damicornis, and Porites australiensis). Our gene expression analysis demonstrated the expressions of these cellulase- and chitinase-like genes during various life stages, including unfertilized eggs, fertilized eggs, zygotes, planula larvae, primary polyps and adults of A. digitifera. Agar plate assays confirmed cellulase and chitinase activities in the tissues extracted from adult branches of several coral species. These results suggested that corals are able to utilize cellulases and chitinases in their life histories. |
format | Online Article Text |
id | pubmed-5710165 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-57101652017-12-03 The presence of genes encoding enzymes that digest carbohydrates in coral genomes and analysis of their activities Yoshioka, Yuki Tanabe, Toshiaki Iguchi, Akira PeerJ Marine Biology Numerous enzymes that digest carbohydrates, such as cellulases and chitinases, are present in various organisms (e.g., termites, nematodes, and so on). Recently, the presence of cellulases and chitinases has been reported in marine organisms such as urchin and bivalves, and their several roles in marine ecosystems have been proposed. In this study, we reported the presence of genes predicted to encode proteins similar to cellulases and chitinases in the genome of the coral Acropora digitifera, their gene expression patterns at various life stages, and cellulose- and chitin-degrading enzyme activities in several coral species (A. digitifera, Galaxea fascicularis, Goniastrea aspera, Montipora digitata, Pavona divaricata, Pocillopora damicornis, and Porites australiensis). Our gene expression analysis demonstrated the expressions of these cellulase- and chitinase-like genes during various life stages, including unfertilized eggs, fertilized eggs, zygotes, planula larvae, primary polyps and adults of A. digitifera. Agar plate assays confirmed cellulase and chitinase activities in the tissues extracted from adult branches of several coral species. These results suggested that corals are able to utilize cellulases and chitinases in their life histories. PeerJ Inc. 2017-11-28 /pmc/articles/PMC5710165/ /pubmed/29201566 http://dx.doi.org/10.7717/peerj.4087 Text en ©2017 Yoshioka et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Marine Biology Yoshioka, Yuki Tanabe, Toshiaki Iguchi, Akira The presence of genes encoding enzymes that digest carbohydrates in coral genomes and analysis of their activities |
title | The presence of genes encoding enzymes that digest carbohydrates in coral genomes and analysis of their activities |
title_full | The presence of genes encoding enzymes that digest carbohydrates in coral genomes and analysis of their activities |
title_fullStr | The presence of genes encoding enzymes that digest carbohydrates in coral genomes and analysis of their activities |
title_full_unstemmed | The presence of genes encoding enzymes that digest carbohydrates in coral genomes and analysis of their activities |
title_short | The presence of genes encoding enzymes that digest carbohydrates in coral genomes and analysis of their activities |
title_sort | presence of genes encoding enzymes that digest carbohydrates in coral genomes and analysis of their activities |
topic | Marine Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5710165/ https://www.ncbi.nlm.nih.gov/pubmed/29201566 http://dx.doi.org/10.7717/peerj.4087 |
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