Cargando…

Network control principles predict neuron function in the Caenorhabditis elegans connectome

Recent studies on the controllability of complex systems offer a powerful mathematical framework to systematically explore the structure-function relationship in biological, social and technological networks1–3. Despite theoretical advances, we lack direct experimental proof of the validity of these...

Descripción completa

Detalles Bibliográficos
Autores principales: Yan, Gang, Vértes, Petra E., Towlson, Emma K., Chew, Yee Lian, Walker, Denise S., Schafer, William R., Barabási, Albert-László
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5710776/
https://www.ncbi.nlm.nih.gov/pubmed/29045391
http://dx.doi.org/10.1038/nature24056
_version_ 1783282952681029632
author Yan, Gang
Vértes, Petra E.
Towlson, Emma K.
Chew, Yee Lian
Walker, Denise S.
Schafer, William R.
Barabási, Albert-László
author_facet Yan, Gang
Vértes, Petra E.
Towlson, Emma K.
Chew, Yee Lian
Walker, Denise S.
Schafer, William R.
Barabási, Albert-László
author_sort Yan, Gang
collection PubMed
description Recent studies on the controllability of complex systems offer a powerful mathematical framework to systematically explore the structure-function relationship in biological, social and technological networks1–3. Despite theoretical advances, we lack direct experimental proof of the validity of these widely used control principles. Here we fill this gap by applying a control framework to the connectome of the nematode C. elegans4–6, allowing us to predict the involvement of each C. elegans neuron in locomotor behaviours. We predict that control of the muscles or motor neurons requires twelve neuronal classes, which include neuronal groups previously implicated in locomotion by laser ablation7–13, as well as one previously uncharacterised neuron, PDB. We validate this prediction experimentally, finding that the ablation of PDB leads to a significant loss of dorsoventral polarity in large body bends. Importantly, control principles also allow us to investigate the involvement of individual neurons within each neuronal class. For example, we predict that, within the class of DD motor neurons, only three (DD04, DD05, or DD06) should affect locomotion when ablated individually. This prediction is also confirmed, with single-cell ablations of DD04 or DD05, but not DD02 or DD03, specifically affecting posterior body movements. Our predictions are robust to deletions of weak connections, missing connections, and rewired connections in the current connectome, indicating the potential applicability of this analytical framework to larger and less well-characterised connectomes.
format Online
Article
Text
id pubmed-5710776
institution National Center for Biotechnology Information
language English
publishDate 2017
record_format MEDLINE/PubMed
spelling pubmed-57107762018-04-18 Network control principles predict neuron function in the Caenorhabditis elegans connectome Yan, Gang Vértes, Petra E. Towlson, Emma K. Chew, Yee Lian Walker, Denise S. Schafer, William R. Barabási, Albert-László Nature Article Recent studies on the controllability of complex systems offer a powerful mathematical framework to systematically explore the structure-function relationship in biological, social and technological networks1–3. Despite theoretical advances, we lack direct experimental proof of the validity of these widely used control principles. Here we fill this gap by applying a control framework to the connectome of the nematode C. elegans4–6, allowing us to predict the involvement of each C. elegans neuron in locomotor behaviours. We predict that control of the muscles or motor neurons requires twelve neuronal classes, which include neuronal groups previously implicated in locomotion by laser ablation7–13, as well as one previously uncharacterised neuron, PDB. We validate this prediction experimentally, finding that the ablation of PDB leads to a significant loss of dorsoventral polarity in large body bends. Importantly, control principles also allow us to investigate the involvement of individual neurons within each neuronal class. For example, we predict that, within the class of DD motor neurons, only three (DD04, DD05, or DD06) should affect locomotion when ablated individually. This prediction is also confirmed, with single-cell ablations of DD04 or DD05, but not DD02 or DD03, specifically affecting posterior body movements. Our predictions are robust to deletions of weak connections, missing connections, and rewired connections in the current connectome, indicating the potential applicability of this analytical framework to larger and less well-characterised connectomes. 2017-10-18 2017-10-26 /pmc/articles/PMC5710776/ /pubmed/29045391 http://dx.doi.org/10.1038/nature24056 Text en Users may view, print, copy, and download text and data-mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use:http://www.nature.com/authors/editorial_policies/license.html#terms
spellingShingle Article
Yan, Gang
Vértes, Petra E.
Towlson, Emma K.
Chew, Yee Lian
Walker, Denise S.
Schafer, William R.
Barabási, Albert-László
Network control principles predict neuron function in the Caenorhabditis elegans connectome
title Network control principles predict neuron function in the Caenorhabditis elegans connectome
title_full Network control principles predict neuron function in the Caenorhabditis elegans connectome
title_fullStr Network control principles predict neuron function in the Caenorhabditis elegans connectome
title_full_unstemmed Network control principles predict neuron function in the Caenorhabditis elegans connectome
title_short Network control principles predict neuron function in the Caenorhabditis elegans connectome
title_sort network control principles predict neuron function in the caenorhabditis elegans connectome
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5710776/
https://www.ncbi.nlm.nih.gov/pubmed/29045391
http://dx.doi.org/10.1038/nature24056
work_keys_str_mv AT yangang networkcontrolprinciplespredictneuronfunctioninthecaenorhabditiselegansconnectome
AT vertespetrae networkcontrolprinciplespredictneuronfunctioninthecaenorhabditiselegansconnectome
AT towlsonemmak networkcontrolprinciplespredictneuronfunctioninthecaenorhabditiselegansconnectome
AT chewyeelian networkcontrolprinciplespredictneuronfunctioninthecaenorhabditiselegansconnectome
AT walkerdenises networkcontrolprinciplespredictneuronfunctioninthecaenorhabditiselegansconnectome
AT schaferwilliamr networkcontrolprinciplespredictneuronfunctioninthecaenorhabditiselegansconnectome
AT barabasialbertlaszlo networkcontrolprinciplespredictneuronfunctioninthecaenorhabditiselegansconnectome