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Automated histological classification of whole slide images of colorectal biopsy specimens

BACKGROUND: An automated image analysis system, e-Pathologist, was developed to improve the quality of colorectal biopsy diagnostics in routine pathology practice. OBJECTIVE: The aim of the study was to evaluate the classification accuracy of the e-Pathologist image analysis software in the setting...

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Autores principales: Yoshida, Hiroshi, Yamashita, Yoshiko, Shimazu, Taichi, Cosatto, Eric, Kiyuna, Tomoharu, Taniguchi, Hirokazu, Sekine, Shigeki, Ochiai, Atsushi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals LLC 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5710880/
https://www.ncbi.nlm.nih.gov/pubmed/29207599
http://dx.doi.org/10.18632/oncotarget.21819
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author Yoshida, Hiroshi
Yamashita, Yoshiko
Shimazu, Taichi
Cosatto, Eric
Kiyuna, Tomoharu
Taniguchi, Hirokazu
Sekine, Shigeki
Ochiai, Atsushi
author_facet Yoshida, Hiroshi
Yamashita, Yoshiko
Shimazu, Taichi
Cosatto, Eric
Kiyuna, Tomoharu
Taniguchi, Hirokazu
Sekine, Shigeki
Ochiai, Atsushi
author_sort Yoshida, Hiroshi
collection PubMed
description BACKGROUND: An automated image analysis system, e-Pathologist, was developed to improve the quality of colorectal biopsy diagnostics in routine pathology practice. OBJECTIVE: The aim of the study was to evaluate the classification accuracy of the e-Pathologist image analysis software in the setting of routine pathology practice in two institutions. MATERIALS AND METHODS: In total, 1328 colorectal tissue specimens were consecutively obtained from two hospitals (1077 tissues from Tokyo hospital, and 251 tissues from East hospital) and the stained specimen slides were anonymized and digitized. At least two experienced gastrointestinal pathologists evaluated each slide for pathological diagnosis. We compared the 3-tier classification results (carcinoma or suspicion of carcinoma, adenoma, and lastly negative for a neoplastic lesion) between the human pathologists and that of e-Pathologist. RESULTS: For the Tokyo hospital specimens, all carcinoma tissues were correctly classified (n=112), and 9.9% (80/810) of the adenoma tissues were incorrectly classified as negative. For the East hospital specimens, 0 out of the 51 adenoma tissues were incorrectly classified as negative while 9.3% (11/118) of the carcinoma tissues were incorrectly classified as either adenoma, or negative. For the Tokyo and East hospital datasets, the undetected rate of carcinoma, undetected rate of adenoma, and over-detected proportion were 0% and 9.3%, 9.9% and 0%, and 36.1% and 27.1%, respectively. CONCLUSIONS: This image analysis system requires some improvements; however, it has the potential to assist pathologists in quality improvement of routine pathological practice in the not too distant future.
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spelling pubmed-57108802017-12-04 Automated histological classification of whole slide images of colorectal biopsy specimens Yoshida, Hiroshi Yamashita, Yoshiko Shimazu, Taichi Cosatto, Eric Kiyuna, Tomoharu Taniguchi, Hirokazu Sekine, Shigeki Ochiai, Atsushi Oncotarget Research Paper: Pathology BACKGROUND: An automated image analysis system, e-Pathologist, was developed to improve the quality of colorectal biopsy diagnostics in routine pathology practice. OBJECTIVE: The aim of the study was to evaluate the classification accuracy of the e-Pathologist image analysis software in the setting of routine pathology practice in two institutions. MATERIALS AND METHODS: In total, 1328 colorectal tissue specimens were consecutively obtained from two hospitals (1077 tissues from Tokyo hospital, and 251 tissues from East hospital) and the stained specimen slides were anonymized and digitized. At least two experienced gastrointestinal pathologists evaluated each slide for pathological diagnosis. We compared the 3-tier classification results (carcinoma or suspicion of carcinoma, adenoma, and lastly negative for a neoplastic lesion) between the human pathologists and that of e-Pathologist. RESULTS: For the Tokyo hospital specimens, all carcinoma tissues were correctly classified (n=112), and 9.9% (80/810) of the adenoma tissues were incorrectly classified as negative. For the East hospital specimens, 0 out of the 51 adenoma tissues were incorrectly classified as negative while 9.3% (11/118) of the carcinoma tissues were incorrectly classified as either adenoma, or negative. For the Tokyo and East hospital datasets, the undetected rate of carcinoma, undetected rate of adenoma, and over-detected proportion were 0% and 9.3%, 9.9% and 0%, and 36.1% and 27.1%, respectively. CONCLUSIONS: This image analysis system requires some improvements; however, it has the potential to assist pathologists in quality improvement of routine pathological practice in the not too distant future. Impact Journals LLC 2017-10-12 /pmc/articles/PMC5710880/ /pubmed/29207599 http://dx.doi.org/10.18632/oncotarget.21819 Text en Copyright: © 2017 Yoshida et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) 3.0 (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper: Pathology
Yoshida, Hiroshi
Yamashita, Yoshiko
Shimazu, Taichi
Cosatto, Eric
Kiyuna, Tomoharu
Taniguchi, Hirokazu
Sekine, Shigeki
Ochiai, Atsushi
Automated histological classification of whole slide images of colorectal biopsy specimens
title Automated histological classification of whole slide images of colorectal biopsy specimens
title_full Automated histological classification of whole slide images of colorectal biopsy specimens
title_fullStr Automated histological classification of whole slide images of colorectal biopsy specimens
title_full_unstemmed Automated histological classification of whole slide images of colorectal biopsy specimens
title_short Automated histological classification of whole slide images of colorectal biopsy specimens
title_sort automated histological classification of whole slide images of colorectal biopsy specimens
topic Research Paper: Pathology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5710880/
https://www.ncbi.nlm.nih.gov/pubmed/29207599
http://dx.doi.org/10.18632/oncotarget.21819
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