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Genome-wide Association Study of Susceptibility to Particulate Matter–Associated QT Prolongation
BACKGROUND: Ambient particulate matter (PM) air pollution exposure has been associated with increases in QT interval duration (QT). However, innate susceptibility to PM-associated QT prolongation has not been characterized. OBJECTIVE: To characterize genetic susceptibility to PM-associated QT prolon...
Autores principales: | , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Environmental Health Perspectives
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5714283/ https://www.ncbi.nlm.nih.gov/pubmed/28749367 http://dx.doi.org/10.1289/EHP347 |
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author | Gondalia, Rahul Avery, Christy L. Napier, Melanie D. Méndez-Giráldez, Raúl Stewart, James D. Sitlani, Colleen M. Li, Yun Wilhelmsen, Kirk C. Duan, Qing Roach, Jeffrey North, Kari E. Reiner, Alexander P. Zhang, Zhu-Ming Tinker, Lesley F. Yanosky, Jeff D. Liao, Duanping Whitsel, Eric A. |
author_facet | Gondalia, Rahul Avery, Christy L. Napier, Melanie D. Méndez-Giráldez, Raúl Stewart, James D. Sitlani, Colleen M. Li, Yun Wilhelmsen, Kirk C. Duan, Qing Roach, Jeffrey North, Kari E. Reiner, Alexander P. Zhang, Zhu-Ming Tinker, Lesley F. Yanosky, Jeff D. Liao, Duanping Whitsel, Eric A. |
author_sort | Gondalia, Rahul |
collection | PubMed |
description | BACKGROUND: Ambient particulate matter (PM) air pollution exposure has been associated with increases in QT interval duration (QT). However, innate susceptibility to PM-associated QT prolongation has not been characterized. OBJECTIVE: To characterize genetic susceptibility to PM-associated QT prolongation in a multi-racial/ethnic, genome-wide association study (GWAS). METHODS: Using repeated electrocardiograms (1986–2004), longitudinal data on [Formula: see text] in diameter ([Formula: see text]), and generalized estimating equations methods adapted for low-prevalence exposure, we estimated approximately [Formula: see text] [Formula: see text] interactions among nine Women’s Health Initiative clinical trials and Atherosclerosis Risk in Communities Study subpopulations ([Formula: see text]), then combined subpopulation-specific results in a fixed-effects, inverse variance-weighted meta-analysis. RESULTS: A common variant (rs1619661; coded allele: T) significantly modified the [Formula: see text] association ([Formula: see text]). At [Formula: see text] concentrations [Formula: see text] percentile, QT increased 7 ms across the CC and TT genotypes: 397 (95% confidence interval: 396, 399) to 404 (403, 404) ms. However, QT changed minimally across rs1619661 genotypes at lower [Formula: see text] concentrations. The rs1619661 variant is on chromosome 10, 132 kilobase (kb) downstream from CXCL12, which encodes a chemokine, stromal cell-derived factor 1, that is expressed in cardiomyocytes and decreases calcium influx across the L-type [Formula: see text] channel. CONCLUSIONS: The findings suggest that biologically plausible genetic factors may alter susceptibility to [Formula: see text]-associated QT prolongation in populations protected by the U.S. Environmental Protection Agency’s National Ambient Air Quality Standards. Independent replication and functional characterization are necessary to validate our findings. https://doi.org/10.1289/EHP347 |
format | Online Article Text |
id | pubmed-5714283 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Environmental Health Perspectives |
record_format | MEDLINE/PubMed |
spelling | pubmed-57142832017-12-05 Genome-wide Association Study of Susceptibility to Particulate Matter–Associated QT Prolongation Gondalia, Rahul Avery, Christy L. Napier, Melanie D. Méndez-Giráldez, Raúl Stewart, James D. Sitlani, Colleen M. Li, Yun Wilhelmsen, Kirk C. Duan, Qing Roach, Jeffrey North, Kari E. Reiner, Alexander P. Zhang, Zhu-Ming Tinker, Lesley F. Yanosky, Jeff D. Liao, Duanping Whitsel, Eric A. Environ Health Perspect Research BACKGROUND: Ambient particulate matter (PM) air pollution exposure has been associated with increases in QT interval duration (QT). However, innate susceptibility to PM-associated QT prolongation has not been characterized. OBJECTIVE: To characterize genetic susceptibility to PM-associated QT prolongation in a multi-racial/ethnic, genome-wide association study (GWAS). METHODS: Using repeated electrocardiograms (1986–2004), longitudinal data on [Formula: see text] in diameter ([Formula: see text]), and generalized estimating equations methods adapted for low-prevalence exposure, we estimated approximately [Formula: see text] [Formula: see text] interactions among nine Women’s Health Initiative clinical trials and Atherosclerosis Risk in Communities Study subpopulations ([Formula: see text]), then combined subpopulation-specific results in a fixed-effects, inverse variance-weighted meta-analysis. RESULTS: A common variant (rs1619661; coded allele: T) significantly modified the [Formula: see text] association ([Formula: see text]). At [Formula: see text] concentrations [Formula: see text] percentile, QT increased 7 ms across the CC and TT genotypes: 397 (95% confidence interval: 396, 399) to 404 (403, 404) ms. However, QT changed minimally across rs1619661 genotypes at lower [Formula: see text] concentrations. The rs1619661 variant is on chromosome 10, 132 kilobase (kb) downstream from CXCL12, which encodes a chemokine, stromal cell-derived factor 1, that is expressed in cardiomyocytes and decreases calcium influx across the L-type [Formula: see text] channel. CONCLUSIONS: The findings suggest that biologically plausible genetic factors may alter susceptibility to [Formula: see text]-associated QT prolongation in populations protected by the U.S. Environmental Protection Agency’s National Ambient Air Quality Standards. Independent replication and functional characterization are necessary to validate our findings. https://doi.org/10.1289/EHP347 Environmental Health Perspectives 2017-06-08 /pmc/articles/PMC5714283/ /pubmed/28749367 http://dx.doi.org/10.1289/EHP347 Text en EHP is an open-access journal published with support from the National Institute of Environmental Health Sciences, National Institutes of Health. All content is public domain unless otherwise noted. |
spellingShingle | Research Gondalia, Rahul Avery, Christy L. Napier, Melanie D. Méndez-Giráldez, Raúl Stewart, James D. Sitlani, Colleen M. Li, Yun Wilhelmsen, Kirk C. Duan, Qing Roach, Jeffrey North, Kari E. Reiner, Alexander P. Zhang, Zhu-Ming Tinker, Lesley F. Yanosky, Jeff D. Liao, Duanping Whitsel, Eric A. Genome-wide Association Study of Susceptibility to Particulate Matter–Associated QT Prolongation |
title | Genome-wide Association Study of Susceptibility to Particulate Matter–Associated QT Prolongation |
title_full | Genome-wide Association Study of Susceptibility to Particulate Matter–Associated QT Prolongation |
title_fullStr | Genome-wide Association Study of Susceptibility to Particulate Matter–Associated QT Prolongation |
title_full_unstemmed | Genome-wide Association Study of Susceptibility to Particulate Matter–Associated QT Prolongation |
title_short | Genome-wide Association Study of Susceptibility to Particulate Matter–Associated QT Prolongation |
title_sort | genome-wide association study of susceptibility to particulate matter–associated qt prolongation |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5714283/ https://www.ncbi.nlm.nih.gov/pubmed/28749367 http://dx.doi.org/10.1289/EHP347 |
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