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Analysis of miRNA expression profiling in human umbilical vein endothelial cells affected by heat stress
To investigate the regulation of endothelial cell (EC) microRNAs (miRNAs) altered by heat stress, miRNA microarrays and bioinformatics methods were used to determine changes in miRNA profiles and the pathophysiological characteristics of differentially expressed miRNAs. A total of 31 differentially...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
D.A. Spandidos
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5716433/ https://www.ncbi.nlm.nih.gov/pubmed/29039486 http://dx.doi.org/10.3892/ijmm.2017.3174 |
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author | Liu, Jie Zhu, Guoguo Xu, Siya Liu, Shixin Lu, Qiping Tang, Zhongzhi |
author_facet | Liu, Jie Zhu, Guoguo Xu, Siya Liu, Shixin Lu, Qiping Tang, Zhongzhi |
author_sort | Liu, Jie |
collection | PubMed |
description | To investigate the regulation of endothelial cell (EC) microRNAs (miRNAs) altered by heat stress, miRNA microarrays and bioinformatics methods were used to determine changes in miRNA profiles and the pathophysiological characteristics of differentially expressed miRNAs. A total of 31 differentially expressed miRNAs were identified, including 20 downregulated and 11 upregulated miRNAs. Gene Ontology (GO) enrichment analysis revealed that the validated targets of the differentially expressed miRNAs were significantly enriched in gene transcription regulation. The pathways were also significantly enriched in the Kyoto Encyclopedia of Genes and Genomes analysis, and most were cancer-related, including the mitogen-activated protein kinase signaling pathway, pathways involved in cancer, the Wnt signaling pathway, the Hippo signaling pathway, proteoglycans involved in cancer and axon guidance. The miRNA-gene and miRNA-GO network analyses revealed several hub miRNAs, genes and functions. Notably, miR-3613-3p played a dominant role in both networks. MAP3K2, MGAT4A, TGFBR1, UBE2R2 and SMAD4 were most likely to be controlled by the altered miRNAs in the miRNA-gene network. The miRNA-GO network analysis revealed significantly complicated associations between miRNAs and different functions, and that the significantly enriched functions targeted by the differentially expressed miRNAs were mostly involved in regulating gene transcription. The present study demonstrated that miRNAs are involved in the pathophysiology of heat-treated ECs. Understanding the functions of miRNAs may provide novel insights into the molecular mechanisms underlying the heat-induced pathophysiology of ECs. |
format | Online Article Text |
id | pubmed-5716433 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | D.A. Spandidos |
record_format | MEDLINE/PubMed |
spelling | pubmed-57164332017-12-10 Analysis of miRNA expression profiling in human umbilical vein endothelial cells affected by heat stress Liu, Jie Zhu, Guoguo Xu, Siya Liu, Shixin Lu, Qiping Tang, Zhongzhi Int J Mol Med Articles To investigate the regulation of endothelial cell (EC) microRNAs (miRNAs) altered by heat stress, miRNA microarrays and bioinformatics methods were used to determine changes in miRNA profiles and the pathophysiological characteristics of differentially expressed miRNAs. A total of 31 differentially expressed miRNAs were identified, including 20 downregulated and 11 upregulated miRNAs. Gene Ontology (GO) enrichment analysis revealed that the validated targets of the differentially expressed miRNAs were significantly enriched in gene transcription regulation. The pathways were also significantly enriched in the Kyoto Encyclopedia of Genes and Genomes analysis, and most were cancer-related, including the mitogen-activated protein kinase signaling pathway, pathways involved in cancer, the Wnt signaling pathway, the Hippo signaling pathway, proteoglycans involved in cancer and axon guidance. The miRNA-gene and miRNA-GO network analyses revealed several hub miRNAs, genes and functions. Notably, miR-3613-3p played a dominant role in both networks. MAP3K2, MGAT4A, TGFBR1, UBE2R2 and SMAD4 were most likely to be controlled by the altered miRNAs in the miRNA-gene network. The miRNA-GO network analysis revealed significantly complicated associations between miRNAs and different functions, and that the significantly enriched functions targeted by the differentially expressed miRNAs were mostly involved in regulating gene transcription. The present study demonstrated that miRNAs are involved in the pathophysiology of heat-treated ECs. Understanding the functions of miRNAs may provide novel insights into the molecular mechanisms underlying the heat-induced pathophysiology of ECs. D.A. Spandidos 2017-12 2017-10-05 /pmc/articles/PMC5716433/ /pubmed/29039486 http://dx.doi.org/10.3892/ijmm.2017.3174 Text en Copyright: © Liu et al. This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made. |
spellingShingle | Articles Liu, Jie Zhu, Guoguo Xu, Siya Liu, Shixin Lu, Qiping Tang, Zhongzhi Analysis of miRNA expression profiling in human umbilical vein endothelial cells affected by heat stress |
title | Analysis of miRNA expression profiling in human umbilical vein endothelial cells affected by heat stress |
title_full | Analysis of miRNA expression profiling in human umbilical vein endothelial cells affected by heat stress |
title_fullStr | Analysis of miRNA expression profiling in human umbilical vein endothelial cells affected by heat stress |
title_full_unstemmed | Analysis of miRNA expression profiling in human umbilical vein endothelial cells affected by heat stress |
title_short | Analysis of miRNA expression profiling in human umbilical vein endothelial cells affected by heat stress |
title_sort | analysis of mirna expression profiling in human umbilical vein endothelial cells affected by heat stress |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5716433/ https://www.ncbi.nlm.nih.gov/pubmed/29039486 http://dx.doi.org/10.3892/ijmm.2017.3174 |
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