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Alzheimer Classification Using a Minimum Spanning Tree of High-Order Functional Network on fMRI Dataset
Functional magnetic resonance imaging (fMRI) is one of the most useful methods to generate functional connectivity networks of the brain. However, conventional network generation methods ignore dynamic changes of functional connectivity between brain regions. Previous studies proposed constructing h...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5717514/ https://www.ncbi.nlm.nih.gov/pubmed/29249926 http://dx.doi.org/10.3389/fnins.2017.00639 |
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author | Guo, Hao Liu, Lei Chen, Junjie Xu, Yong Jie, Xiang |
author_facet | Guo, Hao Liu, Lei Chen, Junjie Xu, Yong Jie, Xiang |
author_sort | Guo, Hao |
collection | PubMed |
description | Functional magnetic resonance imaging (fMRI) is one of the most useful methods to generate functional connectivity networks of the brain. However, conventional network generation methods ignore dynamic changes of functional connectivity between brain regions. Previous studies proposed constructing high-order functional connectivity networks that consider the time-varying characteristics of functional connectivity, and a clustering method was performed to decrease computational cost. However, random selection of the initial clustering centers and the number of clusters negatively affected classification accuracy, and the network lost neurological interpretability. Here we propose a novel method that introduces the minimum spanning tree method to high-order functional connectivity networks. As an unbiased method, the minimum spanning tree simplifies high-order network structure while preserving its core framework. The dynamic characteristics of time series are not lost with this approach, and the neurological interpretation of the network is guaranteed. Simultaneously, we propose a multi-parameter optimization framework that involves extracting discriminative features from the minimum spanning tree high-order functional connectivity networks. Compared with the conventional methods, our resting-state fMRI classification method based on minimum spanning tree high-order functional connectivity networks greatly improved the diagnostic accuracy for Alzheimer's disease. |
format | Online Article Text |
id | pubmed-5717514 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-57175142017-12-15 Alzheimer Classification Using a Minimum Spanning Tree of High-Order Functional Network on fMRI Dataset Guo, Hao Liu, Lei Chen, Junjie Xu, Yong Jie, Xiang Front Neurosci Neuroscience Functional magnetic resonance imaging (fMRI) is one of the most useful methods to generate functional connectivity networks of the brain. However, conventional network generation methods ignore dynamic changes of functional connectivity between brain regions. Previous studies proposed constructing high-order functional connectivity networks that consider the time-varying characteristics of functional connectivity, and a clustering method was performed to decrease computational cost. However, random selection of the initial clustering centers and the number of clusters negatively affected classification accuracy, and the network lost neurological interpretability. Here we propose a novel method that introduces the minimum spanning tree method to high-order functional connectivity networks. As an unbiased method, the minimum spanning tree simplifies high-order network structure while preserving its core framework. The dynamic characteristics of time series are not lost with this approach, and the neurological interpretation of the network is guaranteed. Simultaneously, we propose a multi-parameter optimization framework that involves extracting discriminative features from the minimum spanning tree high-order functional connectivity networks. Compared with the conventional methods, our resting-state fMRI classification method based on minimum spanning tree high-order functional connectivity networks greatly improved the diagnostic accuracy for Alzheimer's disease. Frontiers Media S.A. 2017-12-01 /pmc/articles/PMC5717514/ /pubmed/29249926 http://dx.doi.org/10.3389/fnins.2017.00639 Text en Copyright © 2017 Guo, Liu, Chen, Xu and Jie. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Guo, Hao Liu, Lei Chen, Junjie Xu, Yong Jie, Xiang Alzheimer Classification Using a Minimum Spanning Tree of High-Order Functional Network on fMRI Dataset |
title | Alzheimer Classification Using a Minimum Spanning Tree of High-Order Functional Network on fMRI Dataset |
title_full | Alzheimer Classification Using a Minimum Spanning Tree of High-Order Functional Network on fMRI Dataset |
title_fullStr | Alzheimer Classification Using a Minimum Spanning Tree of High-Order Functional Network on fMRI Dataset |
title_full_unstemmed | Alzheimer Classification Using a Minimum Spanning Tree of High-Order Functional Network on fMRI Dataset |
title_short | Alzheimer Classification Using a Minimum Spanning Tree of High-Order Functional Network on fMRI Dataset |
title_sort | alzheimer classification using a minimum spanning tree of high-order functional network on fmri dataset |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5717514/ https://www.ncbi.nlm.nih.gov/pubmed/29249926 http://dx.doi.org/10.3389/fnins.2017.00639 |
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