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Alzheimer Classification Using a Minimum Spanning Tree of High-Order Functional Network on fMRI Dataset

Functional magnetic resonance imaging (fMRI) is one of the most useful methods to generate functional connectivity networks of the brain. However, conventional network generation methods ignore dynamic changes of functional connectivity between brain regions. Previous studies proposed constructing h...

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Autores principales: Guo, Hao, Liu, Lei, Chen, Junjie, Xu, Yong, Jie, Xiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5717514/
https://www.ncbi.nlm.nih.gov/pubmed/29249926
http://dx.doi.org/10.3389/fnins.2017.00639
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author Guo, Hao
Liu, Lei
Chen, Junjie
Xu, Yong
Jie, Xiang
author_facet Guo, Hao
Liu, Lei
Chen, Junjie
Xu, Yong
Jie, Xiang
author_sort Guo, Hao
collection PubMed
description Functional magnetic resonance imaging (fMRI) is one of the most useful methods to generate functional connectivity networks of the brain. However, conventional network generation methods ignore dynamic changes of functional connectivity between brain regions. Previous studies proposed constructing high-order functional connectivity networks that consider the time-varying characteristics of functional connectivity, and a clustering method was performed to decrease computational cost. However, random selection of the initial clustering centers and the number of clusters negatively affected classification accuracy, and the network lost neurological interpretability. Here we propose a novel method that introduces the minimum spanning tree method to high-order functional connectivity networks. As an unbiased method, the minimum spanning tree simplifies high-order network structure while preserving its core framework. The dynamic characteristics of time series are not lost with this approach, and the neurological interpretation of the network is guaranteed. Simultaneously, we propose a multi-parameter optimization framework that involves extracting discriminative features from the minimum spanning tree high-order functional connectivity networks. Compared with the conventional methods, our resting-state fMRI classification method based on minimum spanning tree high-order functional connectivity networks greatly improved the diagnostic accuracy for Alzheimer's disease.
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spelling pubmed-57175142017-12-15 Alzheimer Classification Using a Minimum Spanning Tree of High-Order Functional Network on fMRI Dataset Guo, Hao Liu, Lei Chen, Junjie Xu, Yong Jie, Xiang Front Neurosci Neuroscience Functional magnetic resonance imaging (fMRI) is one of the most useful methods to generate functional connectivity networks of the brain. However, conventional network generation methods ignore dynamic changes of functional connectivity between brain regions. Previous studies proposed constructing high-order functional connectivity networks that consider the time-varying characteristics of functional connectivity, and a clustering method was performed to decrease computational cost. However, random selection of the initial clustering centers and the number of clusters negatively affected classification accuracy, and the network lost neurological interpretability. Here we propose a novel method that introduces the minimum spanning tree method to high-order functional connectivity networks. As an unbiased method, the minimum spanning tree simplifies high-order network structure while preserving its core framework. The dynamic characteristics of time series are not lost with this approach, and the neurological interpretation of the network is guaranteed. Simultaneously, we propose a multi-parameter optimization framework that involves extracting discriminative features from the minimum spanning tree high-order functional connectivity networks. Compared with the conventional methods, our resting-state fMRI classification method based on minimum spanning tree high-order functional connectivity networks greatly improved the diagnostic accuracy for Alzheimer's disease. Frontiers Media S.A. 2017-12-01 /pmc/articles/PMC5717514/ /pubmed/29249926 http://dx.doi.org/10.3389/fnins.2017.00639 Text en Copyright © 2017 Guo, Liu, Chen, Xu and Jie. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Guo, Hao
Liu, Lei
Chen, Junjie
Xu, Yong
Jie, Xiang
Alzheimer Classification Using a Minimum Spanning Tree of High-Order Functional Network on fMRI Dataset
title Alzheimer Classification Using a Minimum Spanning Tree of High-Order Functional Network on fMRI Dataset
title_full Alzheimer Classification Using a Minimum Spanning Tree of High-Order Functional Network on fMRI Dataset
title_fullStr Alzheimer Classification Using a Minimum Spanning Tree of High-Order Functional Network on fMRI Dataset
title_full_unstemmed Alzheimer Classification Using a Minimum Spanning Tree of High-Order Functional Network on fMRI Dataset
title_short Alzheimer Classification Using a Minimum Spanning Tree of High-Order Functional Network on fMRI Dataset
title_sort alzheimer classification using a minimum spanning tree of high-order functional network on fmri dataset
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5717514/
https://www.ncbi.nlm.nih.gov/pubmed/29249926
http://dx.doi.org/10.3389/fnins.2017.00639
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