Cargando…
Automated classification of dolphin echolocation click types from the Gulf of Mexico
Delphinids produce large numbers of short duration, broadband echolocation clicks which may be useful for species classification in passive acoustic monitoring efforts. A challenge in echolocation click classification is to overcome the many sources of variability to recognize underlying patterns ac...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5720518/ https://www.ncbi.nlm.nih.gov/pubmed/29216184 http://dx.doi.org/10.1371/journal.pcbi.1005823 |
_version_ | 1783284665323356160 |
---|---|
author | Frasier, Kaitlin E. Roch, Marie A. Soldevilla, Melissa S. Wiggins, Sean M. Garrison, Lance P. Hildebrand, John A. |
author_facet | Frasier, Kaitlin E. Roch, Marie A. Soldevilla, Melissa S. Wiggins, Sean M. Garrison, Lance P. Hildebrand, John A. |
author_sort | Frasier, Kaitlin E. |
collection | PubMed |
description | Delphinids produce large numbers of short duration, broadband echolocation clicks which may be useful for species classification in passive acoustic monitoring efforts. A challenge in echolocation click classification is to overcome the many sources of variability to recognize underlying patterns across many detections. An automated unsupervised network-based classification method was developed to simulate the approach a human analyst uses when categorizing click types: Clusters of similar clicks were identified by incorporating multiple click characteristics (spectral shape and inter-click interval distributions) to distinguish within-type from between-type variation, and identify distinct, persistent click types. Once click types were established, an algorithm for classifying novel detections using existing clusters was tested. The automated classification method was applied to a dataset of 52 million clicks detected across five monitoring sites over two years in the Gulf of Mexico (GOM). Seven distinct click types were identified, one of which is known to be associated with an acoustically identifiable delphinid (Risso’s dolphin) and six of which are not yet identified. All types occurred at multiple monitoring locations, but the relative occurrence of types varied, particularly between continental shelf and slope locations. Automatically-identified click types from autonomous seafloor recorders without verifiable species identification were compared with clicks detected on sea-surface towed hydrophone arrays in the presence of visually identified delphinid species. These comparisons suggest potential species identities for the animals producing some echolocation click types. The network-based classification method presented here is effective for rapid, unsupervised delphinid click classification across large datasets in which the click types may not be known a priori. |
format | Online Article Text |
id | pubmed-5720518 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-57205182017-12-15 Automated classification of dolphin echolocation click types from the Gulf of Mexico Frasier, Kaitlin E. Roch, Marie A. Soldevilla, Melissa S. Wiggins, Sean M. Garrison, Lance P. Hildebrand, John A. PLoS Comput Biol Research Article Delphinids produce large numbers of short duration, broadband echolocation clicks which may be useful for species classification in passive acoustic monitoring efforts. A challenge in echolocation click classification is to overcome the many sources of variability to recognize underlying patterns across many detections. An automated unsupervised network-based classification method was developed to simulate the approach a human analyst uses when categorizing click types: Clusters of similar clicks were identified by incorporating multiple click characteristics (spectral shape and inter-click interval distributions) to distinguish within-type from between-type variation, and identify distinct, persistent click types. Once click types were established, an algorithm for classifying novel detections using existing clusters was tested. The automated classification method was applied to a dataset of 52 million clicks detected across five monitoring sites over two years in the Gulf of Mexico (GOM). Seven distinct click types were identified, one of which is known to be associated with an acoustically identifiable delphinid (Risso’s dolphin) and six of which are not yet identified. All types occurred at multiple monitoring locations, but the relative occurrence of types varied, particularly between continental shelf and slope locations. Automatically-identified click types from autonomous seafloor recorders without verifiable species identification were compared with clicks detected on sea-surface towed hydrophone arrays in the presence of visually identified delphinid species. These comparisons suggest potential species identities for the animals producing some echolocation click types. The network-based classification method presented here is effective for rapid, unsupervised delphinid click classification across large datasets in which the click types may not be known a priori. Public Library of Science 2017-12-07 /pmc/articles/PMC5720518/ /pubmed/29216184 http://dx.doi.org/10.1371/journal.pcbi.1005823 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication. |
spellingShingle | Research Article Frasier, Kaitlin E. Roch, Marie A. Soldevilla, Melissa S. Wiggins, Sean M. Garrison, Lance P. Hildebrand, John A. Automated classification of dolphin echolocation click types from the Gulf of Mexico |
title | Automated classification of dolphin echolocation click types from the Gulf of Mexico |
title_full | Automated classification of dolphin echolocation click types from the Gulf of Mexico |
title_fullStr | Automated classification of dolphin echolocation click types from the Gulf of Mexico |
title_full_unstemmed | Automated classification of dolphin echolocation click types from the Gulf of Mexico |
title_short | Automated classification of dolphin echolocation click types from the Gulf of Mexico |
title_sort | automated classification of dolphin echolocation click types from the gulf of mexico |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5720518/ https://www.ncbi.nlm.nih.gov/pubmed/29216184 http://dx.doi.org/10.1371/journal.pcbi.1005823 |
work_keys_str_mv | AT frasierkaitline automatedclassificationofdolphinecholocationclicktypesfromthegulfofmexico AT rochmariea automatedclassificationofdolphinecholocationclicktypesfromthegulfofmexico AT soldevillamelissas automatedclassificationofdolphinecholocationclicktypesfromthegulfofmexico AT wigginsseanm automatedclassificationofdolphinecholocationclicktypesfromthegulfofmexico AT garrisonlancep automatedclassificationofdolphinecholocationclicktypesfromthegulfofmexico AT hildebrandjohna automatedclassificationofdolphinecholocationclicktypesfromthegulfofmexico |