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Poisson pre-processing of nonstationary photonic signals: Signals with equality between mean and variance
Photonic signals are broadly exploited in communication and sensing and they typically exhibit Poisson-like statistics. In a common scenario where the intensity of the photonic signals is low and one needs to remove a nonstationary trend of the signals for any further analysis, one faces an obstacle...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5720749/ https://www.ncbi.nlm.nih.gov/pubmed/29216207 http://dx.doi.org/10.1371/journal.pone.0188622 |
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author | Poplová, Michaela Sovka, Pavel Cifra, Michal |
author_facet | Poplová, Michaela Sovka, Pavel Cifra, Michal |
author_sort | Poplová, Michaela |
collection | PubMed |
description | Photonic signals are broadly exploited in communication and sensing and they typically exhibit Poisson-like statistics. In a common scenario where the intensity of the photonic signals is low and one needs to remove a nonstationary trend of the signals for any further analysis, one faces an obstacle: due to the dependence between the mean and variance typical for a Poisson-like process, information about the trend remains in the variance even after the trend has been subtracted, possibly yielding artifactual results in further analyses. Commonly available detrending or normalizing methods cannot cope with this issue. To alleviate this issue we developed a suitable pre-processing method for the signals that originate from a Poisson-like process. In this paper, a Poisson pre-processing method for nonstationary time series with Poisson distribution is developed and tested on computer-generated model data and experimental data of chemiluminescence from human neutrophils and mung seeds. The presented method transforms a nonstationary Poisson signal into a stationary signal with a Poisson distribution while preserving the type of photocount distribution and phase-space structure of the signal. The importance of the suggested pre-processing method is shown in Fano factor and Hurst exponent analysis of both computer-generated model signals and experimental photonic signals. It is demonstrated that our pre-processing method is superior to standard detrending-based methods whenever further signal analysis is sensitive to variance of the signal. |
format | Online Article Text |
id | pubmed-5720749 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-57207492017-12-15 Poisson pre-processing of nonstationary photonic signals: Signals with equality between mean and variance Poplová, Michaela Sovka, Pavel Cifra, Michal PLoS One Research Article Photonic signals are broadly exploited in communication and sensing and they typically exhibit Poisson-like statistics. In a common scenario where the intensity of the photonic signals is low and one needs to remove a nonstationary trend of the signals for any further analysis, one faces an obstacle: due to the dependence between the mean and variance typical for a Poisson-like process, information about the trend remains in the variance even after the trend has been subtracted, possibly yielding artifactual results in further analyses. Commonly available detrending or normalizing methods cannot cope with this issue. To alleviate this issue we developed a suitable pre-processing method for the signals that originate from a Poisson-like process. In this paper, a Poisson pre-processing method for nonstationary time series with Poisson distribution is developed and tested on computer-generated model data and experimental data of chemiluminescence from human neutrophils and mung seeds. The presented method transforms a nonstationary Poisson signal into a stationary signal with a Poisson distribution while preserving the type of photocount distribution and phase-space structure of the signal. The importance of the suggested pre-processing method is shown in Fano factor and Hurst exponent analysis of both computer-generated model signals and experimental photonic signals. It is demonstrated that our pre-processing method is superior to standard detrending-based methods whenever further signal analysis is sensitive to variance of the signal. Public Library of Science 2017-12-07 /pmc/articles/PMC5720749/ /pubmed/29216207 http://dx.doi.org/10.1371/journal.pone.0188622 Text en © 2017 Poplová et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Poplová, Michaela Sovka, Pavel Cifra, Michal Poisson pre-processing of nonstationary photonic signals: Signals with equality between mean and variance |
title | Poisson pre-processing of nonstationary photonic signals: Signals with equality between mean and variance |
title_full | Poisson pre-processing of nonstationary photonic signals: Signals with equality between mean and variance |
title_fullStr | Poisson pre-processing of nonstationary photonic signals: Signals with equality between mean and variance |
title_full_unstemmed | Poisson pre-processing of nonstationary photonic signals: Signals with equality between mean and variance |
title_short | Poisson pre-processing of nonstationary photonic signals: Signals with equality between mean and variance |
title_sort | poisson pre-processing of nonstationary photonic signals: signals with equality between mean and variance |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5720749/ https://www.ncbi.nlm.nih.gov/pubmed/29216207 http://dx.doi.org/10.1371/journal.pone.0188622 |
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