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Transcriptome-wide association study of inflammatory biologic age
Chronic low grade inflammation is a fundamental mechanism of aging. We estimated biologic age using nine biomarkers from diverse inflammatory pathways and we hypothesized that genes associated with inflammatory biological age would provide insights into human aging. In Framingham Offspring Study par...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals LLC
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5723687/ https://www.ncbi.nlm.nih.gov/pubmed/29135455 http://dx.doi.org/10.18632/aging.101321 |
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author | Lin, Honghuang Lunetta, Kathryn L. Zhao, Qiang Rong, Jian Benjamin, Emelia J. Mendelson, Michael M. Joehanes, Roby Levy, Daniel Larson, Martin G. Murabito, Joanne M. |
author_facet | Lin, Honghuang Lunetta, Kathryn L. Zhao, Qiang Rong, Jian Benjamin, Emelia J. Mendelson, Michael M. Joehanes, Roby Levy, Daniel Larson, Martin G. Murabito, Joanne M. |
author_sort | Lin, Honghuang |
collection | PubMed |
description | Chronic low grade inflammation is a fundamental mechanism of aging. We estimated biologic age using nine biomarkers from diverse inflammatory pathways and we hypothesized that genes associated with inflammatory biological age would provide insights into human aging. In Framingham Offspring Study participants at examination 8 (2005 to 2008), we used the Klemera-Doubal method to estimate inflammatory biologic age and we computed the difference (ΔAge) between biologic age and chronologic age. Gene expression in whole blood was measured using the Affymetrix Human Exon 1.0 ST Array. We used linear mixed effect models to test associations between inflammatory ΔAge and gene expression (dependent variable) adjusting for age, sex, imputed cell counts, and technical covariates. Our study sample included 2386 participants (mean age 67±9 years, 55% women). There were 448 genes significantly were associated with inflammatory ΔAge (P<2.8×10(−6)), 302 genes were positively associated and 146 genes were negatively associated. Pathway analysis among the identified genes highlighted the NOD-like receptor signaling and ubiquitin mediated proteolysis pathways. In summary, we identified 448 genes that were significantly associated with inflammatory biologic age. Future functional characterization may identify molecular interventions to delay aging and prolong healthspan in older adults. |
format | Online Article Text |
id | pubmed-5723687 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Impact Journals LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-57236872017-12-11 Transcriptome-wide association study of inflammatory biologic age Lin, Honghuang Lunetta, Kathryn L. Zhao, Qiang Rong, Jian Benjamin, Emelia J. Mendelson, Michael M. Joehanes, Roby Levy, Daniel Larson, Martin G. Murabito, Joanne M. Aging (Albany NY) Research Paper Chronic low grade inflammation is a fundamental mechanism of aging. We estimated biologic age using nine biomarkers from diverse inflammatory pathways and we hypothesized that genes associated with inflammatory biological age would provide insights into human aging. In Framingham Offspring Study participants at examination 8 (2005 to 2008), we used the Klemera-Doubal method to estimate inflammatory biologic age and we computed the difference (ΔAge) between biologic age and chronologic age. Gene expression in whole blood was measured using the Affymetrix Human Exon 1.0 ST Array. We used linear mixed effect models to test associations between inflammatory ΔAge and gene expression (dependent variable) adjusting for age, sex, imputed cell counts, and technical covariates. Our study sample included 2386 participants (mean age 67±9 years, 55% women). There were 448 genes significantly were associated with inflammatory ΔAge (P<2.8×10(−6)), 302 genes were positively associated and 146 genes were negatively associated. Pathway analysis among the identified genes highlighted the NOD-like receptor signaling and ubiquitin mediated proteolysis pathways. In summary, we identified 448 genes that were significantly associated with inflammatory biologic age. Future functional characterization may identify molecular interventions to delay aging and prolong healthspan in older adults. Impact Journals LLC 2017-11-11 /pmc/articles/PMC5723687/ /pubmed/29135455 http://dx.doi.org/10.18632/aging.101321 Text en Copyright: © 2017 Lin et al. http://creativecommons.org/licenses/by/3.0/ This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) (CC-BY), which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Research Paper Lin, Honghuang Lunetta, Kathryn L. Zhao, Qiang Rong, Jian Benjamin, Emelia J. Mendelson, Michael M. Joehanes, Roby Levy, Daniel Larson, Martin G. Murabito, Joanne M. Transcriptome-wide association study of inflammatory biologic age |
title | Transcriptome-wide association study of inflammatory biologic age |
title_full | Transcriptome-wide association study of inflammatory biologic age |
title_fullStr | Transcriptome-wide association study of inflammatory biologic age |
title_full_unstemmed | Transcriptome-wide association study of inflammatory biologic age |
title_short | Transcriptome-wide association study of inflammatory biologic age |
title_sort | transcriptome-wide association study of inflammatory biologic age |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5723687/ https://www.ncbi.nlm.nih.gov/pubmed/29135455 http://dx.doi.org/10.18632/aging.101321 |
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