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Variants of Lipolysis-Related Genes in Korean Patients with Very High Triglycerides
We investigated the prevalence and characteristics of variants of five lipolysis-related genes in Korean patients with very high triglycerides (TGs). Twenty-six patients with TG levels >885 mg/dL were selected from 13545 Korean subjects. Five candidate genes, LPL, APOC2, GPIHBP1, APOA5, and LMF1,...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Yonsei University College of Medicine
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5725353/ https://www.ncbi.nlm.nih.gov/pubmed/29214790 http://dx.doi.org/10.3349/ymj.2018.59.1.148 |
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author | Lee, Chan Joo Oum, Chi-Yoon Lee, Yunbeom Park, Sungha Kang, Seok-Min Choi, Donghoon Jang, Yangsoo Lee, Ji Hyun Lee, Sang-Hak |
author_facet | Lee, Chan Joo Oum, Chi-Yoon Lee, Yunbeom Park, Sungha Kang, Seok-Min Choi, Donghoon Jang, Yangsoo Lee, Ji Hyun Lee, Sang-Hak |
author_sort | Lee, Chan Joo |
collection | PubMed |
description | We investigated the prevalence and characteristics of variants of five lipolysis-related genes in Korean patients with very high triglycerides (TGs). Twenty-six patients with TG levels >885 mg/dL were selected from 13545 Korean subjects. Five candidate genes, LPL, APOC2, GPIHBP1, APOA5, and LMF1, were sequenced by targeted next-generation sequencing. Predictions of functional effects were performed and matched against public databases of variants. Ten rare variants of three genes were found in nine (34.6%) patients (three in LPL, four in APOA5, and three in LMF1). Five were novel and all variants were suspected of being disease-causing. Nine were heterozygous, and one (3.8%) had a homozygous rare variant of LPL. Six common variants of four genes were observed in 25 (96.2%) patients (one in LPL, one in GPIHBP1, two in APOA5, and two in LMF1). The c.G41T variant of GPIHBP1 and c.G533T variant of APOA5 were most frequent and found in 15 (57.7%) and 14 (53.8%) patients, respectively. Rare homozygous variants of the genes were very uncommon, while diverse rare heterozygous variants were commonly identified. Taken together, most study subjects may be manifesting the combined effects of rare heterozygous variants and common variants. |
format | Online Article Text |
id | pubmed-5725353 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Yonsei University College of Medicine |
record_format | MEDLINE/PubMed |
spelling | pubmed-57253532018-01-01 Variants of Lipolysis-Related Genes in Korean Patients with Very High Triglycerides Lee, Chan Joo Oum, Chi-Yoon Lee, Yunbeom Park, Sungha Kang, Seok-Min Choi, Donghoon Jang, Yangsoo Lee, Ji Hyun Lee, Sang-Hak Yonsei Med J Brief Communication We investigated the prevalence and characteristics of variants of five lipolysis-related genes in Korean patients with very high triglycerides (TGs). Twenty-six patients with TG levels >885 mg/dL were selected from 13545 Korean subjects. Five candidate genes, LPL, APOC2, GPIHBP1, APOA5, and LMF1, were sequenced by targeted next-generation sequencing. Predictions of functional effects were performed and matched against public databases of variants. Ten rare variants of three genes were found in nine (34.6%) patients (three in LPL, four in APOA5, and three in LMF1). Five were novel and all variants were suspected of being disease-causing. Nine were heterozygous, and one (3.8%) had a homozygous rare variant of LPL. Six common variants of four genes were observed in 25 (96.2%) patients (one in LPL, one in GPIHBP1, two in APOA5, and two in LMF1). The c.G41T variant of GPIHBP1 and c.G533T variant of APOA5 were most frequent and found in 15 (57.7%) and 14 (53.8%) patients, respectively. Rare homozygous variants of the genes were very uncommon, while diverse rare heterozygous variants were commonly identified. Taken together, most study subjects may be manifesting the combined effects of rare heterozygous variants and common variants. Yonsei University College of Medicine 2018-01-01 2017-11-29 /pmc/articles/PMC5725353/ /pubmed/29214790 http://dx.doi.org/10.3349/ymj.2018.59.1.148 Text en © Copyright: Yonsei University College of Medicine 2018 http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Brief Communication Lee, Chan Joo Oum, Chi-Yoon Lee, Yunbeom Park, Sungha Kang, Seok-Min Choi, Donghoon Jang, Yangsoo Lee, Ji Hyun Lee, Sang-Hak Variants of Lipolysis-Related Genes in Korean Patients with Very High Triglycerides |
title | Variants of Lipolysis-Related Genes in Korean Patients with Very High Triglycerides |
title_full | Variants of Lipolysis-Related Genes in Korean Patients with Very High Triglycerides |
title_fullStr | Variants of Lipolysis-Related Genes in Korean Patients with Very High Triglycerides |
title_full_unstemmed | Variants of Lipolysis-Related Genes in Korean Patients with Very High Triglycerides |
title_short | Variants of Lipolysis-Related Genes in Korean Patients with Very High Triglycerides |
title_sort | variants of lipolysis-related genes in korean patients with very high triglycerides |
topic | Brief Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5725353/ https://www.ncbi.nlm.nih.gov/pubmed/29214790 http://dx.doi.org/10.3349/ymj.2018.59.1.148 |
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