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Genetic variations at 8q24 and gastric cancer susceptibility: A meta-analysis study

BACKGROUND: Published data on the association between genetic variants on the 8q24 chromosome and gastric cancer (GC) susceptibility are inconclusive. Here we present a meta-analysis designed to evaluate the relationship between 8q24 variants (single nucleotide polymorphisms (SNPs) labeled rs6983267...

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Autores principales: Zhi, Pengke, Shi, Jian, Liu, Feng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5726661/
https://www.ncbi.nlm.nih.gov/pubmed/29232378
http://dx.doi.org/10.1371/journal.pone.0188774
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author Zhi, Pengke
Shi, Jian
Liu, Feng
author_facet Zhi, Pengke
Shi, Jian
Liu, Feng
author_sort Zhi, Pengke
collection PubMed
description BACKGROUND: Published data on the association between genetic variants on the 8q24 chromosome and gastric cancer (GC) susceptibility are inconclusive. Here we present a meta-analysis designed to evaluate the relationship between 8q24 variants (single nucleotide polymorphisms (SNPs) labeled rs6983267 and rs1447295) and risk of developing GC. METHODS: A literature search was performed using studies published on PubMed, Science Direct, OVID and Web of Science databases up to December 2016. Studies were selected based on our enrollment criteria, relevant data was extracted from each study and the odds ratios (OR), and 95% confidence intervals (CI) were calculated and used to assess the strength of associations found between 8q24 polymorphisms and GC risk. Conclusions about acceptable strong associations were made after taking into account sample heterogeneity and sensitivity analyses. RESULTS: A total of seven studies containing ten case-control studies were selected. Among these studies were six studies of 1,421 GC patients and 3,393 controls examining the role of the rs6983267 SNP and four studies including 779 cases and 1,266 controls examining rs1447295 SNP. The pooled results of these studies indicated that there was no significant association between both genetic variants and GC susceptibility using an allele, dominant, recessive and homozygote genetic models. When using a heterozygote genetic model, a significant increase was found in the association of GC risk for rs6983267 SNP (OR = 1.07, 95% CI = 1.01–1.12, P = 0.015), whereas for rs1447295 SNP a significant decreased risk was detected (OR = 0.82, 95% CI = 0.69–0.98, P = 0.030). In subgroup analyses based on ethnicity and genotyping methods, similar non-significant results were observed for the rs1447295 variant using the four genetic models (allele, dominant, recessive or homozygote models) and for the rs6983267 variant using only the allele, recessive and homozygote models. However, after a multiple testing correction to our calculations, these associations remained non-significant. CONCLUSION: Meta-analysis of gastrointestinal cancer genetic analysis studies did not confirm an association between 8q24 chromosome polymorphisms (specifically rs6983267 and rs1447295) and susceptibility to GC in the general populations.
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spelling pubmed-57266612017-12-22 Genetic variations at 8q24 and gastric cancer susceptibility: A meta-analysis study Zhi, Pengke Shi, Jian Liu, Feng PLoS One Research Article BACKGROUND: Published data on the association between genetic variants on the 8q24 chromosome and gastric cancer (GC) susceptibility are inconclusive. Here we present a meta-analysis designed to evaluate the relationship between 8q24 variants (single nucleotide polymorphisms (SNPs) labeled rs6983267 and rs1447295) and risk of developing GC. METHODS: A literature search was performed using studies published on PubMed, Science Direct, OVID and Web of Science databases up to December 2016. Studies were selected based on our enrollment criteria, relevant data was extracted from each study and the odds ratios (OR), and 95% confidence intervals (CI) were calculated and used to assess the strength of associations found between 8q24 polymorphisms and GC risk. Conclusions about acceptable strong associations were made after taking into account sample heterogeneity and sensitivity analyses. RESULTS: A total of seven studies containing ten case-control studies were selected. Among these studies were six studies of 1,421 GC patients and 3,393 controls examining the role of the rs6983267 SNP and four studies including 779 cases and 1,266 controls examining rs1447295 SNP. The pooled results of these studies indicated that there was no significant association between both genetic variants and GC susceptibility using an allele, dominant, recessive and homozygote genetic models. When using a heterozygote genetic model, a significant increase was found in the association of GC risk for rs6983267 SNP (OR = 1.07, 95% CI = 1.01–1.12, P = 0.015), whereas for rs1447295 SNP a significant decreased risk was detected (OR = 0.82, 95% CI = 0.69–0.98, P = 0.030). In subgroup analyses based on ethnicity and genotyping methods, similar non-significant results were observed for the rs1447295 variant using the four genetic models (allele, dominant, recessive or homozygote models) and for the rs6983267 variant using only the allele, recessive and homozygote models. However, after a multiple testing correction to our calculations, these associations remained non-significant. CONCLUSION: Meta-analysis of gastrointestinal cancer genetic analysis studies did not confirm an association between 8q24 chromosome polymorphisms (specifically rs6983267 and rs1447295) and susceptibility to GC in the general populations. Public Library of Science 2017-12-12 /pmc/articles/PMC5726661/ /pubmed/29232378 http://dx.doi.org/10.1371/journal.pone.0188774 Text en © 2017 Zhi et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Zhi, Pengke
Shi, Jian
Liu, Feng
Genetic variations at 8q24 and gastric cancer susceptibility: A meta-analysis study
title Genetic variations at 8q24 and gastric cancer susceptibility: A meta-analysis study
title_full Genetic variations at 8q24 and gastric cancer susceptibility: A meta-analysis study
title_fullStr Genetic variations at 8q24 and gastric cancer susceptibility: A meta-analysis study
title_full_unstemmed Genetic variations at 8q24 and gastric cancer susceptibility: A meta-analysis study
title_short Genetic variations at 8q24 and gastric cancer susceptibility: A meta-analysis study
title_sort genetic variations at 8q24 and gastric cancer susceptibility: a meta-analysis study
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5726661/
https://www.ncbi.nlm.nih.gov/pubmed/29232378
http://dx.doi.org/10.1371/journal.pone.0188774
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