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Structure of outer membrane protein G in lipid bilayers
β-barrel proteins mediate nutrient uptake in bacteria and serve vital functions in cell signaling and adhesion. For the 14-strand outer membrane protein G of Escherichia coli, opening and closing is pH-dependent. Different roles of the extracellular loops in this process were proposed, and X-ray and...
Autores principales: | , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5727033/ https://www.ncbi.nlm.nih.gov/pubmed/29233991 http://dx.doi.org/10.1038/s41467-017-02228-2 |
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author | Retel, Joren S. Nieuwkoop, Andrew J. Hiller, Matthias Higman, Victoria A. Barbet-Massin, Emeline Stanek, Jan Andreas, Loren B. Franks, W. Trent van Rossum, Barth-Jan Vinothkumar, Kutti R. Handel, Lieselotte de Palma, Gregorio Giuseppe Bardiaux, Benjamin Pintacuda, Guido Emsley, Lyndon Kühlbrandt, Werner Oschkinat, Hartmut |
author_facet | Retel, Joren S. Nieuwkoop, Andrew J. Hiller, Matthias Higman, Victoria A. Barbet-Massin, Emeline Stanek, Jan Andreas, Loren B. Franks, W. Trent van Rossum, Barth-Jan Vinothkumar, Kutti R. Handel, Lieselotte de Palma, Gregorio Giuseppe Bardiaux, Benjamin Pintacuda, Guido Emsley, Lyndon Kühlbrandt, Werner Oschkinat, Hartmut |
author_sort | Retel, Joren S. |
collection | PubMed |
description | β-barrel proteins mediate nutrient uptake in bacteria and serve vital functions in cell signaling and adhesion. For the 14-strand outer membrane protein G of Escherichia coli, opening and closing is pH-dependent. Different roles of the extracellular loops in this process were proposed, and X-ray and solution NMR studies were divergent. Here, we report the structure of outer membrane protein G investigated in bilayers of E. coli lipid extracts by magic-angle-spinning NMR. In total, 1847 inter-residue (1)H–(1)H and (13)C–(13)C distance restraints, 256 torsion angles, but no hydrogen bond restraints are used to calculate the structure. The length of β-strands is found to vary beyond the membrane boundary, with strands 6–8 being the longest and the extracellular loops 3 and 4 well ordered. The site of barrel closure at strands 1 and 14 is more disordered than most remaining strands, with the flexibility decreasing toward loops 3 and 4. Loop 4 presents a well-defined helix. |
format | Online Article Text |
id | pubmed-5727033 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-57270332017-12-14 Structure of outer membrane protein G in lipid bilayers Retel, Joren S. Nieuwkoop, Andrew J. Hiller, Matthias Higman, Victoria A. Barbet-Massin, Emeline Stanek, Jan Andreas, Loren B. Franks, W. Trent van Rossum, Barth-Jan Vinothkumar, Kutti R. Handel, Lieselotte de Palma, Gregorio Giuseppe Bardiaux, Benjamin Pintacuda, Guido Emsley, Lyndon Kühlbrandt, Werner Oschkinat, Hartmut Nat Commun Article β-barrel proteins mediate nutrient uptake in bacteria and serve vital functions in cell signaling and adhesion. For the 14-strand outer membrane protein G of Escherichia coli, opening and closing is pH-dependent. Different roles of the extracellular loops in this process were proposed, and X-ray and solution NMR studies were divergent. Here, we report the structure of outer membrane protein G investigated in bilayers of E. coli lipid extracts by magic-angle-spinning NMR. In total, 1847 inter-residue (1)H–(1)H and (13)C–(13)C distance restraints, 256 torsion angles, but no hydrogen bond restraints are used to calculate the structure. The length of β-strands is found to vary beyond the membrane boundary, with strands 6–8 being the longest and the extracellular loops 3 and 4 well ordered. The site of barrel closure at strands 1 and 14 is more disordered than most remaining strands, with the flexibility decreasing toward loops 3 and 4. Loop 4 presents a well-defined helix. Nature Publishing Group UK 2017-12-12 /pmc/articles/PMC5727033/ /pubmed/29233991 http://dx.doi.org/10.1038/s41467-017-02228-2 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Retel, Joren S. Nieuwkoop, Andrew J. Hiller, Matthias Higman, Victoria A. Barbet-Massin, Emeline Stanek, Jan Andreas, Loren B. Franks, W. Trent van Rossum, Barth-Jan Vinothkumar, Kutti R. Handel, Lieselotte de Palma, Gregorio Giuseppe Bardiaux, Benjamin Pintacuda, Guido Emsley, Lyndon Kühlbrandt, Werner Oschkinat, Hartmut Structure of outer membrane protein G in lipid bilayers |
title | Structure of outer membrane protein G in lipid bilayers |
title_full | Structure of outer membrane protein G in lipid bilayers |
title_fullStr | Structure of outer membrane protein G in lipid bilayers |
title_full_unstemmed | Structure of outer membrane protein G in lipid bilayers |
title_short | Structure of outer membrane protein G in lipid bilayers |
title_sort | structure of outer membrane protein g in lipid bilayers |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5727033/ https://www.ncbi.nlm.nih.gov/pubmed/29233991 http://dx.doi.org/10.1038/s41467-017-02228-2 |
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