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A large multi-ethnic genome-wide association study identifies novel genetic loci for intraocular pressure

Elevated intraocular pressure (IOP) is a major risk factor for glaucoma, a leading cause of blindness. IOP heritability has been estimated to up to 67%, and to date only 11 IOP loci have been reported, accounting for 1.5% of IOP variability. Here, we conduct a genome-wide association study of IOP in...

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Autores principales: Choquet, Hélène, Thai, Khanh K., Yin, Jie, Hoffmann, Thomas J., Kvale, Mark N., Banda, Yambazi, Schaefer, Catherine, Risch, Neil, Nair, K. Saidas, Melles, Ronald, Jorgenson, Eric
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5727399/
https://www.ncbi.nlm.nih.gov/pubmed/29235454
http://dx.doi.org/10.1038/s41467-017-01913-6
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author Choquet, Hélène
Thai, Khanh K.
Yin, Jie
Hoffmann, Thomas J.
Kvale, Mark N.
Banda, Yambazi
Schaefer, Catherine
Risch, Neil
Nair, K. Saidas
Melles, Ronald
Jorgenson, Eric
author_facet Choquet, Hélène
Thai, Khanh K.
Yin, Jie
Hoffmann, Thomas J.
Kvale, Mark N.
Banda, Yambazi
Schaefer, Catherine
Risch, Neil
Nair, K. Saidas
Melles, Ronald
Jorgenson, Eric
author_sort Choquet, Hélène
collection PubMed
description Elevated intraocular pressure (IOP) is a major risk factor for glaucoma, a leading cause of blindness. IOP heritability has been estimated to up to 67%, and to date only 11 IOP loci have been reported, accounting for 1.5% of IOP variability. Here, we conduct a genome-wide association study of IOP in 69,756 untreated individuals of European, Latino, Asian, and African ancestry. Multiple longitudinal IOP measurements were collected through electronic health records and, in total, 356,987 measurements were included. We identify 47 genome-wide significant IOP-associated loci (P < 5 × 10(−8)); of the 40 novel loci, 14 replicate at Bonferroni significance in an external genome-wide association study analysis of 37,930 individuals of European and Asian descent. We further examine their effect on the risk of glaucoma within our discovery sample. Using longitudinal IOP measurements from electronic health records improves our power to identify new variants, which together explain 3.7% of IOP variation.
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spelling pubmed-57273992017-12-14 A large multi-ethnic genome-wide association study identifies novel genetic loci for intraocular pressure Choquet, Hélène Thai, Khanh K. Yin, Jie Hoffmann, Thomas J. Kvale, Mark N. Banda, Yambazi Schaefer, Catherine Risch, Neil Nair, K. Saidas Melles, Ronald Jorgenson, Eric Nat Commun Article Elevated intraocular pressure (IOP) is a major risk factor for glaucoma, a leading cause of blindness. IOP heritability has been estimated to up to 67%, and to date only 11 IOP loci have been reported, accounting for 1.5% of IOP variability. Here, we conduct a genome-wide association study of IOP in 69,756 untreated individuals of European, Latino, Asian, and African ancestry. Multiple longitudinal IOP measurements were collected through electronic health records and, in total, 356,987 measurements were included. We identify 47 genome-wide significant IOP-associated loci (P < 5 × 10(−8)); of the 40 novel loci, 14 replicate at Bonferroni significance in an external genome-wide association study analysis of 37,930 individuals of European and Asian descent. We further examine their effect on the risk of glaucoma within our discovery sample. Using longitudinal IOP measurements from electronic health records improves our power to identify new variants, which together explain 3.7% of IOP variation. Nature Publishing Group UK 2017-12-13 /pmc/articles/PMC5727399/ /pubmed/29235454 http://dx.doi.org/10.1038/s41467-017-01913-6 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commonslicense, unless indicated otherwise in a credit line to the material. If material is not included in the article’sCreative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Choquet, Hélène
Thai, Khanh K.
Yin, Jie
Hoffmann, Thomas J.
Kvale, Mark N.
Banda, Yambazi
Schaefer, Catherine
Risch, Neil
Nair, K. Saidas
Melles, Ronald
Jorgenson, Eric
A large multi-ethnic genome-wide association study identifies novel genetic loci for intraocular pressure
title A large multi-ethnic genome-wide association study identifies novel genetic loci for intraocular pressure
title_full A large multi-ethnic genome-wide association study identifies novel genetic loci for intraocular pressure
title_fullStr A large multi-ethnic genome-wide association study identifies novel genetic loci for intraocular pressure
title_full_unstemmed A large multi-ethnic genome-wide association study identifies novel genetic loci for intraocular pressure
title_short A large multi-ethnic genome-wide association study identifies novel genetic loci for intraocular pressure
title_sort large multi-ethnic genome-wide association study identifies novel genetic loci for intraocular pressure
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5727399/
https://www.ncbi.nlm.nih.gov/pubmed/29235454
http://dx.doi.org/10.1038/s41467-017-01913-6
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