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(15)N-Labelling and structure determination of adamantylated azolo-azines in solution
Determining the accurate chemical structures of synthesized compounds is essential for biomedical studies and computer-assisted drug design. The unequivocal determination of N-adamantylation or N-arylation site(s) in nitrogen-rich heterocycles, characterized by a low density of hydrogen atoms, using...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Beilstein-Institut
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5727827/ https://www.ncbi.nlm.nih.gov/pubmed/29259663 http://dx.doi.org/10.3762/bjoc.13.250 |
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author | Deev, Sergey L Paramonov, Alexander S Shestakova, Tatyana S Khalymbadzha, Igor A Chupakhin, Oleg N Subbotina, Julia O Eltsov, Oleg S Slepukhin, Pavel A Rusinov, Vladimir L Arseniev, Alexander S Shenkarev, Zakhar O |
author_facet | Deev, Sergey L Paramonov, Alexander S Shestakova, Tatyana S Khalymbadzha, Igor A Chupakhin, Oleg N Subbotina, Julia O Eltsov, Oleg S Slepukhin, Pavel A Rusinov, Vladimir L Arseniev, Alexander S Shenkarev, Zakhar O |
author_sort | Deev, Sergey L |
collection | PubMed |
description | Determining the accurate chemical structures of synthesized compounds is essential for biomedical studies and computer-assisted drug design. The unequivocal determination of N-adamantylation or N-arylation site(s) in nitrogen-rich heterocycles, characterized by a low density of hydrogen atoms, using NMR methods at natural isotopic abundance is difficult. In these compounds, the heterocyclic moiety is covalently attached to the carbon atom of the substituent group that has no bound hydrogen atoms, and the connection between the two moieties of the compound cannot always be established via conventional (1)H-(1)H and (1)H-(13)C NMR correlation experiments (COSY and HMBC, respectively) or nuclear Overhauser effect spectroscopy (NOESY or ROESY). The selective incorporation of (15)N-labelled atoms in different positions of the heterocyclic core allowed for the use of (1)H-(15)N (J(HN)) and (13)C-(15)N (J(CN)) coupling constants for the structure determinations of N-alkylated nitrogen-containing heterocycles in solution. This method was tested on the N-adamantylated products in a series of azolo-1,2,4-triazines and 1,2,4-triazolo[1,5-a]pyrimidine. The syntheses of adamantylated azolo-azines were based on the interactions of azolo-azines and 1-adamatanol in TFA solution. For azolo-1,2,4-triazinones, the formation of mixtures of N-adamantyl derivatives was observed. The J(HN) and J(CN) values were measured using amplitude-modulated 1D (1)H spin-echo experiments with the selective inversion of the (15)N nuclei and line-shape analysis in the 1D (13)С spectra acquired with selective (15)N decoupling, respectively. Additional spin–spin interactions were detected in the (15)N-HMBC spectra. NMR data and DFT (density functional theory) calculations permitted to suggest a possible mechanism of isomerization for the adamantylated products of the azolo-1,2,4-triazines. The combined analysis of the J(HN) and J(CN) couplings in (15)N-labelled compounds provides an efficient method for the structure determination of N-alkylated azolo-azines even in the case of isomer formation. The isomerization of adamantylated tetrazolo[1,5-b][1,2,4]triazin-7-ones in acidic conditions occurs through the formation of the adamantyl cation. |
format | Online Article Text |
id | pubmed-5727827 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Beilstein-Institut |
record_format | MEDLINE/PubMed |
spelling | pubmed-57278272017-12-19 (15)N-Labelling and structure determination of adamantylated azolo-azines in solution Deev, Sergey L Paramonov, Alexander S Shestakova, Tatyana S Khalymbadzha, Igor A Chupakhin, Oleg N Subbotina, Julia O Eltsov, Oleg S Slepukhin, Pavel A Rusinov, Vladimir L Arseniev, Alexander S Shenkarev, Zakhar O Beilstein J Org Chem Full Research Paper Determining the accurate chemical structures of synthesized compounds is essential for biomedical studies and computer-assisted drug design. The unequivocal determination of N-adamantylation or N-arylation site(s) in nitrogen-rich heterocycles, characterized by a low density of hydrogen atoms, using NMR methods at natural isotopic abundance is difficult. In these compounds, the heterocyclic moiety is covalently attached to the carbon atom of the substituent group that has no bound hydrogen atoms, and the connection between the two moieties of the compound cannot always be established via conventional (1)H-(1)H and (1)H-(13)C NMR correlation experiments (COSY and HMBC, respectively) or nuclear Overhauser effect spectroscopy (NOESY or ROESY). The selective incorporation of (15)N-labelled atoms in different positions of the heterocyclic core allowed for the use of (1)H-(15)N (J(HN)) and (13)C-(15)N (J(CN)) coupling constants for the structure determinations of N-alkylated nitrogen-containing heterocycles in solution. This method was tested on the N-adamantylated products in a series of azolo-1,2,4-triazines and 1,2,4-triazolo[1,5-a]pyrimidine. The syntheses of adamantylated azolo-azines were based on the interactions of azolo-azines and 1-adamatanol in TFA solution. For azolo-1,2,4-triazinones, the formation of mixtures of N-adamantyl derivatives was observed. The J(HN) and J(CN) values were measured using amplitude-modulated 1D (1)H spin-echo experiments with the selective inversion of the (15)N nuclei and line-shape analysis in the 1D (13)С spectra acquired with selective (15)N decoupling, respectively. Additional spin–spin interactions were detected in the (15)N-HMBC spectra. NMR data and DFT (density functional theory) calculations permitted to suggest a possible mechanism of isomerization for the adamantylated products of the azolo-1,2,4-triazines. The combined analysis of the J(HN) and J(CN) couplings in (15)N-labelled compounds provides an efficient method for the structure determination of N-alkylated azolo-azines even in the case of isomer formation. The isomerization of adamantylated tetrazolo[1,5-b][1,2,4]triazin-7-ones in acidic conditions occurs through the formation of the adamantyl cation. Beilstein-Institut 2017-11-29 /pmc/articles/PMC5727827/ /pubmed/29259663 http://dx.doi.org/10.3762/bjoc.13.250 Text en Copyright © 2017, Deev et al. https://creativecommons.org/licenses/by/4.0https://www.beilstein-journals.org/bjoc/termsThis is an Open Access article under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The license is subject to the Beilstein Journal of Organic Chemistry terms and conditions: (https://www.beilstein-journals.org/bjoc/terms) |
spellingShingle | Full Research Paper Deev, Sergey L Paramonov, Alexander S Shestakova, Tatyana S Khalymbadzha, Igor A Chupakhin, Oleg N Subbotina, Julia O Eltsov, Oleg S Slepukhin, Pavel A Rusinov, Vladimir L Arseniev, Alexander S Shenkarev, Zakhar O (15)N-Labelling and structure determination of adamantylated azolo-azines in solution |
title | (15)N-Labelling and structure determination of adamantylated azolo-azines in solution |
title_full | (15)N-Labelling and structure determination of adamantylated azolo-azines in solution |
title_fullStr | (15)N-Labelling and structure determination of adamantylated azolo-azines in solution |
title_full_unstemmed | (15)N-Labelling and structure determination of adamantylated azolo-azines in solution |
title_short | (15)N-Labelling and structure determination of adamantylated azolo-azines in solution |
title_sort | (15)n-labelling and structure determination of adamantylated azolo-azines in solution |
topic | Full Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5727827/ https://www.ncbi.nlm.nih.gov/pubmed/29259663 http://dx.doi.org/10.3762/bjoc.13.250 |
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