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Kinetic isotope effects and how to describe them
We review several methods for computing kinetic isotope effects in chemical reactions including semiclassical and quantum instanton theory. These methods describe both the quantization of vibrational modes as well as tunneling and are applied to the ⋅H + H(2) and ⋅H + CH(4) reactions. The absolute r...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Crystallographic Association
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5729036/ https://www.ncbi.nlm.nih.gov/pubmed/29282447 http://dx.doi.org/10.1063/1.4996339 |
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author | Karandashev, Konstantin Xu, Zhen-Hao Meuwly, Markus Vaníček, Jiří Richardson, Jeremy O. |
author_facet | Karandashev, Konstantin Xu, Zhen-Hao Meuwly, Markus Vaníček, Jiří Richardson, Jeremy O. |
author_sort | Karandashev, Konstantin |
collection | PubMed |
description | We review several methods for computing kinetic isotope effects in chemical reactions including semiclassical and quantum instanton theory. These methods describe both the quantization of vibrational modes as well as tunneling and are applied to the ⋅H + H(2) and ⋅H + CH(4) reactions. The absolute rate constants computed with the semiclassical instanton method both using on-the-fly electronic structure calculations and fitted potential-energy surfaces are also compared directly with exact quantum dynamics results. The error inherent in the instanton approximation is found to be relatively small and similar in magnitude to that introduced by using fitted surfaces. The kinetic isotope effect computed by the quantum instanton is even more accurate, and although it is computationally more expensive, the efficiency can be improved by path-integral acceleration techniques. We also test a simple approach for designing potential-energy surfaces for the example of proton transfer in malonaldehyde. The tunneling splittings are computed, and although they are found to deviate from experimental results, the ratio of the splitting to that of an isotopically substituted form is in much better agreement. We discuss the strengths and limitations of the potential-energy surface and based on our findings suggest ways in which it can be improved. |
format | Online Article Text |
id | pubmed-5729036 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | American Crystallographic Association |
record_format | MEDLINE/PubMed |
spelling | pubmed-57290362017-12-27 Kinetic isotope effects and how to describe them Karandashev, Konstantin Xu, Zhen-Hao Meuwly, Markus Vaníček, Jiří Richardson, Jeremy O. Struct Dyn Swiss National Center of Competence in Research: Molecular Ultrafast Science and Technology We review several methods for computing kinetic isotope effects in chemical reactions including semiclassical and quantum instanton theory. These methods describe both the quantization of vibrational modes as well as tunneling and are applied to the ⋅H + H(2) and ⋅H + CH(4) reactions. The absolute rate constants computed with the semiclassical instanton method both using on-the-fly electronic structure calculations and fitted potential-energy surfaces are also compared directly with exact quantum dynamics results. The error inherent in the instanton approximation is found to be relatively small and similar in magnitude to that introduced by using fitted surfaces. The kinetic isotope effect computed by the quantum instanton is even more accurate, and although it is computationally more expensive, the efficiency can be improved by path-integral acceleration techniques. We also test a simple approach for designing potential-energy surfaces for the example of proton transfer in malonaldehyde. The tunneling splittings are computed, and although they are found to deviate from experimental results, the ratio of the splitting to that of an isotopically substituted form is in much better agreement. We discuss the strengths and limitations of the potential-energy surface and based on our findings suggest ways in which it can be improved. American Crystallographic Association 2017-12-13 /pmc/articles/PMC5729036/ /pubmed/29282447 http://dx.doi.org/10.1063/1.4996339 Text en © 2017 Author(s). 2329-7778/2017/4(6)/061501/19 All article content, except where otherwise noted, is licensed under a Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Swiss National Center of Competence in Research: Molecular Ultrafast Science and Technology Karandashev, Konstantin Xu, Zhen-Hao Meuwly, Markus Vaníček, Jiří Richardson, Jeremy O. Kinetic isotope effects and how to describe them |
title | Kinetic isotope effects and how to describe them |
title_full | Kinetic isotope effects and how to describe them |
title_fullStr | Kinetic isotope effects and how to describe them |
title_full_unstemmed | Kinetic isotope effects and how to describe them |
title_short | Kinetic isotope effects and how to describe them |
title_sort | kinetic isotope effects and how to describe them |
topic | Swiss National Center of Competence in Research: Molecular Ultrafast Science and Technology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5729036/ https://www.ncbi.nlm.nih.gov/pubmed/29282447 http://dx.doi.org/10.1063/1.4996339 |
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