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Gene Expression as a Dosimeter in Irradiated Drosophila melanogaster

Biological indicators would be of use in radiation dosimetry in situations where an exposed person is not wearing a dosimeter, or when physical dosimeters are insufficient to estimate the risk caused by the radiation exposure. In this work, we investigate the use of gene expression as a dosimeter. G...

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Autores principales: Shrestha, Samana, Vanasse, Adam, Cooper, Leon N, Antosh, Michael P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Mary Ann Liebert, Inc. 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5729855/
https://www.ncbi.nlm.nih.gov/pubmed/29035581
http://dx.doi.org/10.1089/cmb.2017.0170
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author Shrestha, Samana
Vanasse, Adam
Cooper, Leon N
Antosh, Michael P.
author_facet Shrestha, Samana
Vanasse, Adam
Cooper, Leon N
Antosh, Michael P.
author_sort Shrestha, Samana
collection PubMed
description Biological indicators would be of use in radiation dosimetry in situations where an exposed person is not wearing a dosimeter, or when physical dosimeters are insufficient to estimate the risk caused by the radiation exposure. In this work, we investigate the use of gene expression as a dosimeter. Gene expression analysis was done on 15,222 genes of Drosophila melanogaster (fruit flies) at days 2, 10, and 20 postirradiation, with X-ray exposures of 10, 1000, 5000, 10,000, and 20,000 roentgens. Several genes were identified, which could serve as a biodosimeter in an irradiated D. melanogaster model. Many of these genes have human homologues. Six genes showed a linear response (R(2) > 0.9) with dose at all time points. One of these genes, inverted repeat-binding protein, is a known DNA repair gene and has a human homologue (XRCC6). The lowest dose, 10 roentgen, is very low for fruit flies. If the lowest dose is excluded, 13 genes showed a linear response with dose at all time points. This includes 5 of 6 genes that were linear with all radiation doses included. Of these 13 genes, 4 have human homologues and 8 have known functions. The expression of this panel of genes, particularly those with human homologues, could potentially be used as the biological indicator of radiation exposure in dosimetry applications.
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spelling pubmed-57298552017-12-15 Gene Expression as a Dosimeter in Irradiated Drosophila melanogaster Shrestha, Samana Vanasse, Adam Cooper, Leon N Antosh, Michael P. J Comput Biol Research Articles Biological indicators would be of use in radiation dosimetry in situations where an exposed person is not wearing a dosimeter, or when physical dosimeters are insufficient to estimate the risk caused by the radiation exposure. In this work, we investigate the use of gene expression as a dosimeter. Gene expression analysis was done on 15,222 genes of Drosophila melanogaster (fruit flies) at days 2, 10, and 20 postirradiation, with X-ray exposures of 10, 1000, 5000, 10,000, and 20,000 roentgens. Several genes were identified, which could serve as a biodosimeter in an irradiated D. melanogaster model. Many of these genes have human homologues. Six genes showed a linear response (R(2) > 0.9) with dose at all time points. One of these genes, inverted repeat-binding protein, is a known DNA repair gene and has a human homologue (XRCC6). The lowest dose, 10 roentgen, is very low for fruit flies. If the lowest dose is excluded, 13 genes showed a linear response with dose at all time points. This includes 5 of 6 genes that were linear with all radiation doses included. Of these 13 genes, 4 have human homologues and 8 have known functions. The expression of this panel of genes, particularly those with human homologues, could potentially be used as the biological indicator of radiation exposure in dosimetry applications. Mary Ann Liebert, Inc. 2017-12-01 2017-12-01 /pmc/articles/PMC5729855/ /pubmed/29035581 http://dx.doi.org/10.1089/cmb.2017.0170 Text en © Samana Shrestha, et al., 2017. Published by Mary Ann Liebert, Inc. This Open Access article is distributed under the terms of the Creative Commons License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited.
spellingShingle Research Articles
Shrestha, Samana
Vanasse, Adam
Cooper, Leon N
Antosh, Michael P.
Gene Expression as a Dosimeter in Irradiated Drosophila melanogaster
title Gene Expression as a Dosimeter in Irradiated Drosophila melanogaster
title_full Gene Expression as a Dosimeter in Irradiated Drosophila melanogaster
title_fullStr Gene Expression as a Dosimeter in Irradiated Drosophila melanogaster
title_full_unstemmed Gene Expression as a Dosimeter in Irradiated Drosophila melanogaster
title_short Gene Expression as a Dosimeter in Irradiated Drosophila melanogaster
title_sort gene expression as a dosimeter in irradiated drosophila melanogaster
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5729855/
https://www.ncbi.nlm.nih.gov/pubmed/29035581
http://dx.doi.org/10.1089/cmb.2017.0170
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