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Structural parameters of dimethyl sulfoxide, DMSO, at 100 K, based on a redetermination by use of high-quality single-crystal X-ray data
The title compound, C(2)H(6)OS, is a high melting, polar and aprotic solvent widely used in organic and inorganic chemistry. It serves as a H-atom acceptor in hydrogen bonding and is used as an ambidentate ligand in coordination chemistry. The evaluation of the influence of intermolecular interact...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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International Union of Crystallography
2017
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5730283/ https://www.ncbi.nlm.nih.gov/pubmed/29250346 http://dx.doi.org/10.1107/S2056989017012464 |
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author | Reuter, Hans |
author_facet | Reuter, Hans |
author_sort | Reuter, Hans |
collection | PubMed |
description | The title compound, C(2)H(6)OS, is a high melting, polar and aprotic solvent widely used in organic and inorganic chemistry. It serves as a H-atom acceptor in hydrogen bonding and is used as an ambidentate ligand in coordination chemistry. The evaluation of the influence of intermolecular interactions on the internal structural parameters of the chemically bonded DMSO molecules affords precise structural data of the free molecule as a point of reference. So far, valid data have been obtained only by use of neutron powder diffraction [Ibberson (2005 ▸). Acta Cryst. C61, o571–o573]. In the present redetermination, structural data have been obtained from a single-crystal X-ray diffraction experiment at 100 K, revealing a better comparison with DMSO molecules in other crystal structures. In the solid state, the pyramidal molecule exhibits a nearly perfect C (s) symmetry [including H atoms, which are eclipsed with respect to the C⋯C axis], with a C—S—C bond angle of 97.73 (7)° and an S—O bond length of 1.5040 (10) Å, corresponding very well with an S=O double bond, and with almost equal S—C bond lengths [mean value = 1.783 (4) Å] and O—S—C bond angles [mean value = 106.57 (4)°]. The crystal packing is influenced by C—H⋯O interactions (2.42–2.47 Å) between all three H atoms of only one methyl group with the O atoms of three neighbouring DMSO molecules. The interactions of the O atom with H atoms (or Lewis acids, or hydrogen-donor groups) of adjacent molecules in relation to the orientation of the complete DMSO molecule are described in terms of the angle ω and the distance d (norm); ω is the angle between the pseudo-mirror plane of the molecule and the plane defined through the S=O bond and the interacting atom, and d (norm) is the distance of the interacting atom from the plane perpendicular to the S=O bond. |
format | Online Article Text |
id | pubmed-5730283 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-57302832017-12-15 Structural parameters of dimethyl sulfoxide, DMSO, at 100 K, based on a redetermination by use of high-quality single-crystal X-ray data Reuter, Hans Acta Crystallogr E Crystallogr Commun Research Communications The title compound, C(2)H(6)OS, is a high melting, polar and aprotic solvent widely used in organic and inorganic chemistry. It serves as a H-atom acceptor in hydrogen bonding and is used as an ambidentate ligand in coordination chemistry. The evaluation of the influence of intermolecular interactions on the internal structural parameters of the chemically bonded DMSO molecules affords precise structural data of the free molecule as a point of reference. So far, valid data have been obtained only by use of neutron powder diffraction [Ibberson (2005 ▸). Acta Cryst. C61, o571–o573]. In the present redetermination, structural data have been obtained from a single-crystal X-ray diffraction experiment at 100 K, revealing a better comparison with DMSO molecules in other crystal structures. In the solid state, the pyramidal molecule exhibits a nearly perfect C (s) symmetry [including H atoms, which are eclipsed with respect to the C⋯C axis], with a C—S—C bond angle of 97.73 (7)° and an S—O bond length of 1.5040 (10) Å, corresponding very well with an S=O double bond, and with almost equal S—C bond lengths [mean value = 1.783 (4) Å] and O—S—C bond angles [mean value = 106.57 (4)°]. The crystal packing is influenced by C—H⋯O interactions (2.42–2.47 Å) between all three H atoms of only one methyl group with the O atoms of three neighbouring DMSO molecules. The interactions of the O atom with H atoms (or Lewis acids, or hydrogen-donor groups) of adjacent molecules in relation to the orientation of the complete DMSO molecule are described in terms of the angle ω and the distance d (norm); ω is the angle between the pseudo-mirror plane of the molecule and the plane defined through the S=O bond and the interacting atom, and d (norm) is the distance of the interacting atom from the plane perpendicular to the S=O bond. International Union of Crystallography 2017-09-05 /pmc/articles/PMC5730283/ /pubmed/29250346 http://dx.doi.org/10.1107/S2056989017012464 Text en © Hans Reuter 2017 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/2.0/uk/ |
spellingShingle | Research Communications Reuter, Hans Structural parameters of dimethyl sulfoxide, DMSO, at 100 K, based on a redetermination by use of high-quality single-crystal X-ray data |
title | Structural parameters of dimethyl sulfoxide, DMSO, at 100 K, based on a redetermination by use of high-quality single-crystal X-ray data |
title_full | Structural parameters of dimethyl sulfoxide, DMSO, at 100 K, based on a redetermination by use of high-quality single-crystal X-ray data |
title_fullStr | Structural parameters of dimethyl sulfoxide, DMSO, at 100 K, based on a redetermination by use of high-quality single-crystal X-ray data |
title_full_unstemmed | Structural parameters of dimethyl sulfoxide, DMSO, at 100 K, based on a redetermination by use of high-quality single-crystal X-ray data |
title_short | Structural parameters of dimethyl sulfoxide, DMSO, at 100 K, based on a redetermination by use of high-quality single-crystal X-ray data |
title_sort | structural parameters of dimethyl sulfoxide, dmso, at 100 k, based on a redetermination by use of high-quality single-crystal x-ray data |
topic | Research Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5730283/ https://www.ncbi.nlm.nih.gov/pubmed/29250346 http://dx.doi.org/10.1107/S2056989017012464 |
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