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Data visualization, bar naked: A free tool for creating interactive graphics
Although bar graphs are designed for categorical data, they are routinely used to present continuous data in studies that have small sample sizes. This presentation is problematic, as many data distributions can lead to the same bar graph, and the actual data may suggest different conclusions from t...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Society for Biochemistry and Molecular Biology
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5733595/ https://www.ncbi.nlm.nih.gov/pubmed/28974579 http://dx.doi.org/10.1074/jbc.RA117.000147 |
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author | Weissgerber, Tracey L. Savic, Marko Winham, Stacey J. Stanisavljevic, Dejana Garovic, Vesna D. Milic, Natasa M. |
author_facet | Weissgerber, Tracey L. Savic, Marko Winham, Stacey J. Stanisavljevic, Dejana Garovic, Vesna D. Milic, Natasa M. |
author_sort | Weissgerber, Tracey L. |
collection | PubMed |
description | Although bar graphs are designed for categorical data, they are routinely used to present continuous data in studies that have small sample sizes. This presentation is problematic, as many data distributions can lead to the same bar graph, and the actual data may suggest different conclusions from the summary statistics. To address this problem, many journals have implemented new policies that require authors to show the data distribution. This paper introduces a free, web-based tool for creating an interactive alternative to the bar graph (http://statistika.mfub.bg.ac.rs/interactive-dotplot/). This tool allows authors with no programming expertise to create customized interactive graphics, including univariate scatterplots, box plots, and violin plots, for comparing values of a continuous variable across different study groups. Individual data points may be overlaid on the graphs. Additional features facilitate visualization of subgroups or clusters of non-independent data. A second tool enables authors to create interactive graphics from data obtained with repeated independent experiments (http://statistika.mfub.bg.ac.rs/interactive-repeated-experiments-dotplot/). These tools are designed to encourage exploration and critical evaluation of the data behind the summary statistics and may be valuable for promoting transparency, reproducibility, and open science in basic biomedical research. |
format | Online Article Text |
id | pubmed-5733595 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | American Society for Biochemistry and Molecular Biology |
record_format | MEDLINE/PubMed |
spelling | pubmed-57335952017-12-19 Data visualization, bar naked: A free tool for creating interactive graphics Weissgerber, Tracey L. Savic, Marko Winham, Stacey J. Stanisavljevic, Dejana Garovic, Vesna D. Milic, Natasa M. J Biol Chem Methods and Resources Although bar graphs are designed for categorical data, they are routinely used to present continuous data in studies that have small sample sizes. This presentation is problematic, as many data distributions can lead to the same bar graph, and the actual data may suggest different conclusions from the summary statistics. To address this problem, many journals have implemented new policies that require authors to show the data distribution. This paper introduces a free, web-based tool for creating an interactive alternative to the bar graph (http://statistika.mfub.bg.ac.rs/interactive-dotplot/). This tool allows authors with no programming expertise to create customized interactive graphics, including univariate scatterplots, box plots, and violin plots, for comparing values of a continuous variable across different study groups. Individual data points may be overlaid on the graphs. Additional features facilitate visualization of subgroups or clusters of non-independent data. A second tool enables authors to create interactive graphics from data obtained with repeated independent experiments (http://statistika.mfub.bg.ac.rs/interactive-repeated-experiments-dotplot/). These tools are designed to encourage exploration and critical evaluation of the data behind the summary statistics and may be valuable for promoting transparency, reproducibility, and open science in basic biomedical research. American Society for Biochemistry and Molecular Biology 2017-12-15 2017-10-03 /pmc/articles/PMC5733595/ /pubmed/28974579 http://dx.doi.org/10.1074/jbc.RA117.000147 Text en © 2017 by The American Society for Biochemistry and Molecular Biology, Inc. Author's Choice—Final version free via Creative Commons CC-BY license (http://creativecommons.org/licenses/by/4.0) . |
spellingShingle | Methods and Resources Weissgerber, Tracey L. Savic, Marko Winham, Stacey J. Stanisavljevic, Dejana Garovic, Vesna D. Milic, Natasa M. Data visualization, bar naked: A free tool for creating interactive graphics |
title | Data visualization, bar naked: A free tool for creating interactive graphics |
title_full | Data visualization, bar naked: A free tool for creating interactive graphics |
title_fullStr | Data visualization, bar naked: A free tool for creating interactive graphics |
title_full_unstemmed | Data visualization, bar naked: A free tool for creating interactive graphics |
title_short | Data visualization, bar naked: A free tool for creating interactive graphics |
title_sort | data visualization, bar naked: a free tool for creating interactive graphics |
topic | Methods and Resources |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5733595/ https://www.ncbi.nlm.nih.gov/pubmed/28974579 http://dx.doi.org/10.1074/jbc.RA117.000147 |
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