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Diagnostic accuracy of loop-mediated isothermal amplification (LAMP) for screening patients with imported malaria in a non-endemic setting

Background: Sensitive and easy-to-perform methods for the diagnosis of malaria are not yet available. Improving the limit of detection and following the requirements for certification are issues to be addressed in both endemic and non-endemic settings. The aim of this study was to test whether loop-...

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Autores principales: Ponce, Camille, Kaczorowski, Flora, Perpoint, Thomas, Miailhes, Patrick, Sigal, Alain, Javouhey, Etienne, Gillet, Yves, Jacquin, Laurent, Douplat, Marion, Tazarourte, Karim, Potinet, Véronique, Simon, Bruno, Lavoignat, Adeline, Bonnot, Guillaume, Sow, Fatimata, Bienvenu, Anne-Lise, Picot, Stéphane
Formato: Online Artículo Texto
Lenguaje:English
Publicado: EDP Sciences 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5734902/
https://www.ncbi.nlm.nih.gov/pubmed/29251261
http://dx.doi.org/10.1051/parasite/2017054
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author Ponce, Camille
Kaczorowski, Flora
Perpoint, Thomas
Miailhes, Patrick
Sigal, Alain
Javouhey, Etienne
Gillet, Yves
Jacquin, Laurent
Douplat, Marion
Tazarourte, Karim
Potinet, Véronique
Simon, Bruno
Lavoignat, Adeline
Bonnot, Guillaume
Sow, Fatimata
Bienvenu, Anne-Lise
Picot, Stéphane
author_facet Ponce, Camille
Kaczorowski, Flora
Perpoint, Thomas
Miailhes, Patrick
Sigal, Alain
Javouhey, Etienne
Gillet, Yves
Jacquin, Laurent
Douplat, Marion
Tazarourte, Karim
Potinet, Véronique
Simon, Bruno
Lavoignat, Adeline
Bonnot, Guillaume
Sow, Fatimata
Bienvenu, Anne-Lise
Picot, Stéphane
author_sort Ponce, Camille
collection PubMed
description Background: Sensitive and easy-to-perform methods for the diagnosis of malaria are not yet available. Improving the limit of detection and following the requirements for certification are issues to be addressed in both endemic and non-endemic settings. The aim of this study was to test whether loop-mediated isothermal amplification of DNA (LAMP) may be an alternative to microscopy or real-time PCR for the screening of imported malaria cases in non-endemic area. Results: 310 blood samples associated with 829 suspected cases of imported malaria were tested during a one year period. Microscopy (thin and thick stained blood slides, reference standard) was used for the diagnosis. Real-time PCR was used as a standard of truth, and LAMP (Meridian Malaria Plus) was used as an index test in a prospective study conducted following the Standards for Reporting Diagnosis Accuracy Studies. In the 83 positive samples, species identification was P. falciparum (n = 66), P. ovale (n = 9), P. vivax (n = 3) P. malariae (n = 3) and 2 co-infections with P. falciparum + P.malariae. Using LAMP methods, 93 samples gave positive results, including 4 false-positives. Sensitivity, specificity, positive predictive value and negative predictive value for LAMP tests were 100%, 98.13%, 95.51%, and 100% compared to PCR. Conclusion: High negative predictive value, and limit of detection suggest that LAMP can be used for screening of imported malaria cases in non-endemic countries when expert microscopists are not immediately available. However, the rare occurrence of non-valid results and the need for species identification and quantification of positive samples preclude the use of LAMP as a single reference method.
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spelling pubmed-57349022017-12-29 Diagnostic accuracy of loop-mediated isothermal amplification (LAMP) for screening patients with imported malaria in a non-endemic setting Ponce, Camille Kaczorowski, Flora Perpoint, Thomas Miailhes, Patrick Sigal, Alain Javouhey, Etienne Gillet, Yves Jacquin, Laurent Douplat, Marion Tazarourte, Karim Potinet, Véronique Simon, Bruno Lavoignat, Adeline Bonnot, Guillaume Sow, Fatimata Bienvenu, Anne-Lise Picot, Stéphane Parasite Research Article Background: Sensitive and easy-to-perform methods for the diagnosis of malaria are not yet available. Improving the limit of detection and following the requirements for certification are issues to be addressed in both endemic and non-endemic settings. The aim of this study was to test whether loop-mediated isothermal amplification of DNA (LAMP) may be an alternative to microscopy or real-time PCR for the screening of imported malaria cases in non-endemic area. Results: 310 blood samples associated with 829 suspected cases of imported malaria were tested during a one year period. Microscopy (thin and thick stained blood slides, reference standard) was used for the diagnosis. Real-time PCR was used as a standard of truth, and LAMP (Meridian Malaria Plus) was used as an index test in a prospective study conducted following the Standards for Reporting Diagnosis Accuracy Studies. In the 83 positive samples, species identification was P. falciparum (n = 66), P. ovale (n = 9), P. vivax (n = 3) P. malariae (n = 3) and 2 co-infections with P. falciparum + P.malariae. Using LAMP methods, 93 samples gave positive results, including 4 false-positives. Sensitivity, specificity, positive predictive value and negative predictive value for LAMP tests were 100%, 98.13%, 95.51%, and 100% compared to PCR. Conclusion: High negative predictive value, and limit of detection suggest that LAMP can be used for screening of imported malaria cases in non-endemic countries when expert microscopists are not immediately available. However, the rare occurrence of non-valid results and the need for species identification and quantification of positive samples preclude the use of LAMP as a single reference method. EDP Sciences 2017-12-18 /pmc/articles/PMC5734902/ /pubmed/29251261 http://dx.doi.org/10.1051/parasite/2017054 Text en © C. Ponce et al., published by EDP Sciences, 2017 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Ponce, Camille
Kaczorowski, Flora
Perpoint, Thomas
Miailhes, Patrick
Sigal, Alain
Javouhey, Etienne
Gillet, Yves
Jacquin, Laurent
Douplat, Marion
Tazarourte, Karim
Potinet, Véronique
Simon, Bruno
Lavoignat, Adeline
Bonnot, Guillaume
Sow, Fatimata
Bienvenu, Anne-Lise
Picot, Stéphane
Diagnostic accuracy of loop-mediated isothermal amplification (LAMP) for screening patients with imported malaria in a non-endemic setting
title Diagnostic accuracy of loop-mediated isothermal amplification (LAMP) for screening patients with imported malaria in a non-endemic setting
title_full Diagnostic accuracy of loop-mediated isothermal amplification (LAMP) for screening patients with imported malaria in a non-endemic setting
title_fullStr Diagnostic accuracy of loop-mediated isothermal amplification (LAMP) for screening patients with imported malaria in a non-endemic setting
title_full_unstemmed Diagnostic accuracy of loop-mediated isothermal amplification (LAMP) for screening patients with imported malaria in a non-endemic setting
title_short Diagnostic accuracy of loop-mediated isothermal amplification (LAMP) for screening patients with imported malaria in a non-endemic setting
title_sort diagnostic accuracy of loop-mediated isothermal amplification (lamp) for screening patients with imported malaria in a non-endemic setting
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5734902/
https://www.ncbi.nlm.nih.gov/pubmed/29251261
http://dx.doi.org/10.1051/parasite/2017054
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