Cargando…
Diagnostic accuracy of loop-mediated isothermal amplification (LAMP) for screening patients with imported malaria in a non-endemic setting
Background: Sensitive and easy-to-perform methods for the diagnosis of malaria are not yet available. Improving the limit of detection and following the requirements for certification are issues to be addressed in both endemic and non-endemic settings. The aim of this study was to test whether loop-...
Autores principales: | , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
EDP Sciences
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5734902/ https://www.ncbi.nlm.nih.gov/pubmed/29251261 http://dx.doi.org/10.1051/parasite/2017054 |
_version_ | 1783287112267726848 |
---|---|
author | Ponce, Camille Kaczorowski, Flora Perpoint, Thomas Miailhes, Patrick Sigal, Alain Javouhey, Etienne Gillet, Yves Jacquin, Laurent Douplat, Marion Tazarourte, Karim Potinet, Véronique Simon, Bruno Lavoignat, Adeline Bonnot, Guillaume Sow, Fatimata Bienvenu, Anne-Lise Picot, Stéphane |
author_facet | Ponce, Camille Kaczorowski, Flora Perpoint, Thomas Miailhes, Patrick Sigal, Alain Javouhey, Etienne Gillet, Yves Jacquin, Laurent Douplat, Marion Tazarourte, Karim Potinet, Véronique Simon, Bruno Lavoignat, Adeline Bonnot, Guillaume Sow, Fatimata Bienvenu, Anne-Lise Picot, Stéphane |
author_sort | Ponce, Camille |
collection | PubMed |
description | Background: Sensitive and easy-to-perform methods for the diagnosis of malaria are not yet available. Improving the limit of detection and following the requirements for certification are issues to be addressed in both endemic and non-endemic settings. The aim of this study was to test whether loop-mediated isothermal amplification of DNA (LAMP) may be an alternative to microscopy or real-time PCR for the screening of imported malaria cases in non-endemic area. Results: 310 blood samples associated with 829 suspected cases of imported malaria were tested during a one year period. Microscopy (thin and thick stained blood slides, reference standard) was used for the diagnosis. Real-time PCR was used as a standard of truth, and LAMP (Meridian Malaria Plus) was used as an index test in a prospective study conducted following the Standards for Reporting Diagnosis Accuracy Studies. In the 83 positive samples, species identification was P. falciparum (n = 66), P. ovale (n = 9), P. vivax (n = 3) P. malariae (n = 3) and 2 co-infections with P. falciparum + P.malariae. Using LAMP methods, 93 samples gave positive results, including 4 false-positives. Sensitivity, specificity, positive predictive value and negative predictive value for LAMP tests were 100%, 98.13%, 95.51%, and 100% compared to PCR. Conclusion: High negative predictive value, and limit of detection suggest that LAMP can be used for screening of imported malaria cases in non-endemic countries when expert microscopists are not immediately available. However, the rare occurrence of non-valid results and the need for species identification and quantification of positive samples preclude the use of LAMP as a single reference method. |
format | Online Article Text |
id | pubmed-5734902 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | EDP Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-57349022017-12-29 Diagnostic accuracy of loop-mediated isothermal amplification (LAMP) for screening patients with imported malaria in a non-endemic setting Ponce, Camille Kaczorowski, Flora Perpoint, Thomas Miailhes, Patrick Sigal, Alain Javouhey, Etienne Gillet, Yves Jacquin, Laurent Douplat, Marion Tazarourte, Karim Potinet, Véronique Simon, Bruno Lavoignat, Adeline Bonnot, Guillaume Sow, Fatimata Bienvenu, Anne-Lise Picot, Stéphane Parasite Research Article Background: Sensitive and easy-to-perform methods for the diagnosis of malaria are not yet available. Improving the limit of detection and following the requirements for certification are issues to be addressed in both endemic and non-endemic settings. The aim of this study was to test whether loop-mediated isothermal amplification of DNA (LAMP) may be an alternative to microscopy or real-time PCR for the screening of imported malaria cases in non-endemic area. Results: 310 blood samples associated with 829 suspected cases of imported malaria were tested during a one year period. Microscopy (thin and thick stained blood slides, reference standard) was used for the diagnosis. Real-time PCR was used as a standard of truth, and LAMP (Meridian Malaria Plus) was used as an index test in a prospective study conducted following the Standards for Reporting Diagnosis Accuracy Studies. In the 83 positive samples, species identification was P. falciparum (n = 66), P. ovale (n = 9), P. vivax (n = 3) P. malariae (n = 3) and 2 co-infections with P. falciparum + P.malariae. Using LAMP methods, 93 samples gave positive results, including 4 false-positives. Sensitivity, specificity, positive predictive value and negative predictive value for LAMP tests were 100%, 98.13%, 95.51%, and 100% compared to PCR. Conclusion: High negative predictive value, and limit of detection suggest that LAMP can be used for screening of imported malaria cases in non-endemic countries when expert microscopists are not immediately available. However, the rare occurrence of non-valid results and the need for species identification and quantification of positive samples preclude the use of LAMP as a single reference method. EDP Sciences 2017-12-18 /pmc/articles/PMC5734902/ /pubmed/29251261 http://dx.doi.org/10.1051/parasite/2017054 Text en © C. Ponce et al., published by EDP Sciences, 2017 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Ponce, Camille Kaczorowski, Flora Perpoint, Thomas Miailhes, Patrick Sigal, Alain Javouhey, Etienne Gillet, Yves Jacquin, Laurent Douplat, Marion Tazarourte, Karim Potinet, Véronique Simon, Bruno Lavoignat, Adeline Bonnot, Guillaume Sow, Fatimata Bienvenu, Anne-Lise Picot, Stéphane Diagnostic accuracy of loop-mediated isothermal amplification (LAMP) for screening patients with imported malaria in a non-endemic setting |
title | Diagnostic accuracy of loop-mediated isothermal amplification (LAMP) for screening patients with imported malaria in a non-endemic setting |
title_full | Diagnostic accuracy of loop-mediated isothermal amplification (LAMP) for screening patients with imported malaria in a non-endemic setting |
title_fullStr | Diagnostic accuracy of loop-mediated isothermal amplification (LAMP) for screening patients with imported malaria in a non-endemic setting |
title_full_unstemmed | Diagnostic accuracy of loop-mediated isothermal amplification (LAMP) for screening patients with imported malaria in a non-endemic setting |
title_short | Diagnostic accuracy of loop-mediated isothermal amplification (LAMP) for screening patients with imported malaria in a non-endemic setting |
title_sort | diagnostic accuracy of loop-mediated isothermal amplification (lamp) for screening patients with imported malaria in a non-endemic setting |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5734902/ https://www.ncbi.nlm.nih.gov/pubmed/29251261 http://dx.doi.org/10.1051/parasite/2017054 |
work_keys_str_mv | AT poncecamille diagnosticaccuracyofloopmediatedisothermalamplificationlampforscreeningpatientswithimportedmalariainanonendemicsetting AT kaczorowskiflora diagnosticaccuracyofloopmediatedisothermalamplificationlampforscreeningpatientswithimportedmalariainanonendemicsetting AT perpointthomas diagnosticaccuracyofloopmediatedisothermalamplificationlampforscreeningpatientswithimportedmalariainanonendemicsetting AT miailhespatrick diagnosticaccuracyofloopmediatedisothermalamplificationlampforscreeningpatientswithimportedmalariainanonendemicsetting AT sigalalain diagnosticaccuracyofloopmediatedisothermalamplificationlampforscreeningpatientswithimportedmalariainanonendemicsetting AT javouheyetienne diagnosticaccuracyofloopmediatedisothermalamplificationlampforscreeningpatientswithimportedmalariainanonendemicsetting AT gilletyves diagnosticaccuracyofloopmediatedisothermalamplificationlampforscreeningpatientswithimportedmalariainanonendemicsetting AT jacquinlaurent diagnosticaccuracyofloopmediatedisothermalamplificationlampforscreeningpatientswithimportedmalariainanonendemicsetting AT douplatmarion diagnosticaccuracyofloopmediatedisothermalamplificationlampforscreeningpatientswithimportedmalariainanonendemicsetting AT tazarourtekarim diagnosticaccuracyofloopmediatedisothermalamplificationlampforscreeningpatientswithimportedmalariainanonendemicsetting AT potinetveronique diagnosticaccuracyofloopmediatedisothermalamplificationlampforscreeningpatientswithimportedmalariainanonendemicsetting AT simonbruno diagnosticaccuracyofloopmediatedisothermalamplificationlampforscreeningpatientswithimportedmalariainanonendemicsetting AT lavoignatadeline diagnosticaccuracyofloopmediatedisothermalamplificationlampforscreeningpatientswithimportedmalariainanonendemicsetting AT bonnotguillaume diagnosticaccuracyofloopmediatedisothermalamplificationlampforscreeningpatientswithimportedmalariainanonendemicsetting AT sowfatimata diagnosticaccuracyofloopmediatedisothermalamplificationlampforscreeningpatientswithimportedmalariainanonendemicsetting AT bienvenuannelise diagnosticaccuracyofloopmediatedisothermalamplificationlampforscreeningpatientswithimportedmalariainanonendemicsetting AT picotstephane diagnosticaccuracyofloopmediatedisothermalamplificationlampforscreeningpatientswithimportedmalariainanonendemicsetting |