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Draft genome sequence of Acidithiobacillus thiooxidans CLST isolated from the acidic hypersaline Gorbea salt flat in northern Chile
10.1601/nm.2199 CLST is an extremely acidophilic gamma-proteobacteria that was isolated from the Gorbea salt flat, an acidic hypersaline environment in northern Chile. This kind of environment is considered a terrestrial analog of ancient Martian terrains and a source of new material for biotechnolo...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5735861/ https://www.ncbi.nlm.nih.gov/pubmed/29270251 http://dx.doi.org/10.1186/s40793-017-0305-8 |
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author | Quatrini, Raquel Escudero, Lorena V. Moya-Beltrán, Ana Galleguillos, Pedro A. Issotta, Francisco Acosta, Mauricio Cárdenas, Juan Pablo Nuñez, Harold Salinas, Karina Holmes, David S. Demergasso, Cecilia |
author_facet | Quatrini, Raquel Escudero, Lorena V. Moya-Beltrán, Ana Galleguillos, Pedro A. Issotta, Francisco Acosta, Mauricio Cárdenas, Juan Pablo Nuñez, Harold Salinas, Karina Holmes, David S. Demergasso, Cecilia |
author_sort | Quatrini, Raquel |
collection | PubMed |
description | 10.1601/nm.2199 CLST is an extremely acidophilic gamma-proteobacteria that was isolated from the Gorbea salt flat, an acidic hypersaline environment in northern Chile. This kind of environment is considered a terrestrial analog of ancient Martian terrains and a source of new material for biotechnological applications. 10.1601/nm.2199 plays a key role in industrial bioleaching; it has the capacity of generating and maintaining acidic conditions by producing sulfuric acid and it can also remove sulfur layers from the surface of minerals, which are detrimental for their dissolution. CLST is a strain of 10.1601/nm.2199 able to tolerate moderate chloride concentrations (up to 15 g L(−1) Cl(−)), a feature that is quite unusual in extreme acidophilic microorganisms. Basic microbiological features and genomic properties of this biotechnologically relevant strain are described in this work. The 3,974,949 bp draft genome is arranged into 40 scaffolds of 389 contigs containing 3866 protein-coding genes and 75 RNAs encoding genes. This is the first draft genome of a halotolerant 10.1601/nm.2199 strain. The release of the genome sequence of this strain improves representation of these extreme acidophilic Gram negative bacteria in public databases and strengthens the framework for further investigation of the physiological diversity and ecological function of 10.1601/nm.2199 populations. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s40793-017-0305-8) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-5735861 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-57358612017-12-21 Draft genome sequence of Acidithiobacillus thiooxidans CLST isolated from the acidic hypersaline Gorbea salt flat in northern Chile Quatrini, Raquel Escudero, Lorena V. Moya-Beltrán, Ana Galleguillos, Pedro A. Issotta, Francisco Acosta, Mauricio Cárdenas, Juan Pablo Nuñez, Harold Salinas, Karina Holmes, David S. Demergasso, Cecilia Stand Genomic Sci Extended Genome Report 10.1601/nm.2199 CLST is an extremely acidophilic gamma-proteobacteria that was isolated from the Gorbea salt flat, an acidic hypersaline environment in northern Chile. This kind of environment is considered a terrestrial analog of ancient Martian terrains and a source of new material for biotechnological applications. 10.1601/nm.2199 plays a key role in industrial bioleaching; it has the capacity of generating and maintaining acidic conditions by producing sulfuric acid and it can also remove sulfur layers from the surface of minerals, which are detrimental for their dissolution. CLST is a strain of 10.1601/nm.2199 able to tolerate moderate chloride concentrations (up to 15 g L(−1) Cl(−)), a feature that is quite unusual in extreme acidophilic microorganisms. Basic microbiological features and genomic properties of this biotechnologically relevant strain are described in this work. The 3,974,949 bp draft genome is arranged into 40 scaffolds of 389 contigs containing 3866 protein-coding genes and 75 RNAs encoding genes. This is the first draft genome of a halotolerant 10.1601/nm.2199 strain. The release of the genome sequence of this strain improves representation of these extreme acidophilic Gram negative bacteria in public databases and strengthens the framework for further investigation of the physiological diversity and ecological function of 10.1601/nm.2199 populations. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s40793-017-0305-8) contains supplementary material, which is available to authorized users. BioMed Central 2017-12-19 /pmc/articles/PMC5735861/ /pubmed/29270251 http://dx.doi.org/10.1186/s40793-017-0305-8 Text en © The Author(s). 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Extended Genome Report Quatrini, Raquel Escudero, Lorena V. Moya-Beltrán, Ana Galleguillos, Pedro A. Issotta, Francisco Acosta, Mauricio Cárdenas, Juan Pablo Nuñez, Harold Salinas, Karina Holmes, David S. Demergasso, Cecilia Draft genome sequence of Acidithiobacillus thiooxidans CLST isolated from the acidic hypersaline Gorbea salt flat in northern Chile |
title | Draft genome sequence of Acidithiobacillus thiooxidans CLST isolated from the acidic hypersaline Gorbea salt flat in northern Chile |
title_full | Draft genome sequence of Acidithiobacillus thiooxidans CLST isolated from the acidic hypersaline Gorbea salt flat in northern Chile |
title_fullStr | Draft genome sequence of Acidithiobacillus thiooxidans CLST isolated from the acidic hypersaline Gorbea salt flat in northern Chile |
title_full_unstemmed | Draft genome sequence of Acidithiobacillus thiooxidans CLST isolated from the acidic hypersaline Gorbea salt flat in northern Chile |
title_short | Draft genome sequence of Acidithiobacillus thiooxidans CLST isolated from the acidic hypersaline Gorbea salt flat in northern Chile |
title_sort | draft genome sequence of acidithiobacillus thiooxidans clst isolated from the acidic hypersaline gorbea salt flat in northern chile |
topic | Extended Genome Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5735861/ https://www.ncbi.nlm.nih.gov/pubmed/29270251 http://dx.doi.org/10.1186/s40793-017-0305-8 |
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