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Automatized image processing of bovine blastocysts produced in vitro for quantitative variable determination

There is currently no objective, real-time and non-invasive method for evaluating the quality of mammalian embryos. In this study, we processed images of in vitro produced bovine blastocysts to obtain a deeper comprehension of the embryonic morphological aspects that are related to the standard eval...

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Autores principales: Rocha, José Celso, Passalia, Felipe José, Matos, Felipe Delestro, Takahashi, Maria Beatriz, Maserati Jr, Marc Peter, Alves, Mayra Fernanda, de Almeida, Tamie Guibu, Cardoso, Bruna Lopes, Basso, Andrea Cristina, Nogueira, Marcelo Fábio Gouveia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5735923/
https://www.ncbi.nlm.nih.gov/pubmed/29257125
http://dx.doi.org/10.1038/sdata.2017.192
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author Rocha, José Celso
Passalia, Felipe José
Matos, Felipe Delestro
Takahashi, Maria Beatriz
Maserati Jr, Marc Peter
Alves, Mayra Fernanda
de Almeida, Tamie Guibu
Cardoso, Bruna Lopes
Basso, Andrea Cristina
Nogueira, Marcelo Fábio Gouveia
author_facet Rocha, José Celso
Passalia, Felipe José
Matos, Felipe Delestro
Takahashi, Maria Beatriz
Maserati Jr, Marc Peter
Alves, Mayra Fernanda
de Almeida, Tamie Guibu
Cardoso, Bruna Lopes
Basso, Andrea Cristina
Nogueira, Marcelo Fábio Gouveia
author_sort Rocha, José Celso
collection PubMed
description There is currently no objective, real-time and non-invasive method for evaluating the quality of mammalian embryos. In this study, we processed images of in vitro produced bovine blastocysts to obtain a deeper comprehension of the embryonic morphological aspects that are related to the standard evaluation of blastocysts. Information was extracted from 482 digital images of blastocysts. The resulting imaging data were individually evaluated by three experienced embryologists who graded their quality. To avoid evaluation bias, each image was related to the modal value of the evaluations. Automated image processing produced 36 quantitative variables for each image. The images, the modal and individual quality grades, and the variables extracted could potentially be used in the development of artificial intelligence techniques (e.g., evolutionary algorithms and artificial neural networks), multivariate modelling and the study of defined structures of the whole blastocyst.
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spelling pubmed-57359232017-12-21 Automatized image processing of bovine blastocysts produced in vitro for quantitative variable determination Rocha, José Celso Passalia, Felipe José Matos, Felipe Delestro Takahashi, Maria Beatriz Maserati Jr, Marc Peter Alves, Mayra Fernanda de Almeida, Tamie Guibu Cardoso, Bruna Lopes Basso, Andrea Cristina Nogueira, Marcelo Fábio Gouveia Sci Data Data Descriptor There is currently no objective, real-time and non-invasive method for evaluating the quality of mammalian embryos. In this study, we processed images of in vitro produced bovine blastocysts to obtain a deeper comprehension of the embryonic morphological aspects that are related to the standard evaluation of blastocysts. Information was extracted from 482 digital images of blastocysts. The resulting imaging data were individually evaluated by three experienced embryologists who graded their quality. To avoid evaluation bias, each image was related to the modal value of the evaluations. Automated image processing produced 36 quantitative variables for each image. The images, the modal and individual quality grades, and the variables extracted could potentially be used in the development of artificial intelligence techniques (e.g., evolutionary algorithms and artificial neural networks), multivariate modelling and the study of defined structures of the whole blastocyst. Nature Publishing Group 2017-12-19 /pmc/articles/PMC5735923/ /pubmed/29257125 http://dx.doi.org/10.1038/sdata.2017.192 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0/ Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ The Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ applies to the metadata files made available in this article.
spellingShingle Data Descriptor
Rocha, José Celso
Passalia, Felipe José
Matos, Felipe Delestro
Takahashi, Maria Beatriz
Maserati Jr, Marc Peter
Alves, Mayra Fernanda
de Almeida, Tamie Guibu
Cardoso, Bruna Lopes
Basso, Andrea Cristina
Nogueira, Marcelo Fábio Gouveia
Automatized image processing of bovine blastocysts produced in vitro for quantitative variable determination
title Automatized image processing of bovine blastocysts produced in vitro for quantitative variable determination
title_full Automatized image processing of bovine blastocysts produced in vitro for quantitative variable determination
title_fullStr Automatized image processing of bovine blastocysts produced in vitro for quantitative variable determination
title_full_unstemmed Automatized image processing of bovine blastocysts produced in vitro for quantitative variable determination
title_short Automatized image processing of bovine blastocysts produced in vitro for quantitative variable determination
title_sort automatized image processing of bovine blastocysts produced in vitro for quantitative variable determination
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5735923/
https://www.ncbi.nlm.nih.gov/pubmed/29257125
http://dx.doi.org/10.1038/sdata.2017.192
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