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De novo design and synthesis of a 30-cistron translation-factor module
Two of the many goals of synthetic biology are synthesizing large biochemical systems and simplifying their assembly. While several genes have been assembled together by modular idempotent cloning, it is unclear if such simplified strategies scale to very large constructs for expression and purifica...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5737471/ https://www.ncbi.nlm.nih.gov/pubmed/28977654 http://dx.doi.org/10.1093/nar/gkx753 |
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author | Shepherd, Tyson R. Du, Liping Liljeruhm, Josefine Samudyata, Wang, Jinfan Sjödin, Marcus O.D. Wetterhall, Magnus Yomo, Tetsuya Forster, Anthony C. |
author_facet | Shepherd, Tyson R. Du, Liping Liljeruhm, Josefine Samudyata, Wang, Jinfan Sjödin, Marcus O.D. Wetterhall, Magnus Yomo, Tetsuya Forster, Anthony C. |
author_sort | Shepherd, Tyson R. |
collection | PubMed |
description | Two of the many goals of synthetic biology are synthesizing large biochemical systems and simplifying their assembly. While several genes have been assembled together by modular idempotent cloning, it is unclear if such simplified strategies scale to very large constructs for expression and purification of whole pathways. Here we synthesize from oligodeoxyribonucleotides a completely de-novo-designed, 58-kb multigene DNA. This BioBrick plasmid insert encodes 30 of the 31 translation factors of the PURE translation system, each His-tagged and in separate transcription cistrons. Dividing the insert between three high-copy expression plasmids enables the bulk purification of the aminoacyl-tRNA synthetases and translation factors necessary for affordable, scalable reconstitution of an in vitro transcription and translation system, PURE 3.0. |
format | Online Article Text |
id | pubmed-5737471 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-57374712018-01-09 De novo design and synthesis of a 30-cistron translation-factor module Shepherd, Tyson R. Du, Liping Liljeruhm, Josefine Samudyata, Wang, Jinfan Sjödin, Marcus O.D. Wetterhall, Magnus Yomo, Tetsuya Forster, Anthony C. Nucleic Acids Res Synthetic Biology and Bioengineering Two of the many goals of synthetic biology are synthesizing large biochemical systems and simplifying their assembly. While several genes have been assembled together by modular idempotent cloning, it is unclear if such simplified strategies scale to very large constructs for expression and purification of whole pathways. Here we synthesize from oligodeoxyribonucleotides a completely de-novo-designed, 58-kb multigene DNA. This BioBrick plasmid insert encodes 30 of the 31 translation factors of the PURE translation system, each His-tagged and in separate transcription cistrons. Dividing the insert between three high-copy expression plasmids enables the bulk purification of the aminoacyl-tRNA synthetases and translation factors necessary for affordable, scalable reconstitution of an in vitro transcription and translation system, PURE 3.0. Oxford University Press 2017-10-13 2017-09-04 /pmc/articles/PMC5737471/ /pubmed/28977654 http://dx.doi.org/10.1093/nar/gkx753 Text en © The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Synthetic Biology and Bioengineering Shepherd, Tyson R. Du, Liping Liljeruhm, Josefine Samudyata, Wang, Jinfan Sjödin, Marcus O.D. Wetterhall, Magnus Yomo, Tetsuya Forster, Anthony C. De novo design and synthesis of a 30-cistron translation-factor module |
title |
De novo design and synthesis of a 30-cistron translation-factor module |
title_full |
De novo design and synthesis of a 30-cistron translation-factor module |
title_fullStr |
De novo design and synthesis of a 30-cistron translation-factor module |
title_full_unstemmed |
De novo design and synthesis of a 30-cistron translation-factor module |
title_short |
De novo design and synthesis of a 30-cistron translation-factor module |
title_sort | de novo design and synthesis of a 30-cistron translation-factor module |
topic | Synthetic Biology and Bioengineering |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5737471/ https://www.ncbi.nlm.nih.gov/pubmed/28977654 http://dx.doi.org/10.1093/nar/gkx753 |
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